Roseimicrobium sp. ORNL1: G5S37_24270
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Entry
G5S37_24270 CDS
T06460
Name
(GenBank) SDR family oxidoreductase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo00521
Streptomycin biosynthesis
roo00523
Polyketide sugar unit biosynthesis
roo00525
Acarbose and validamycin biosynthesis
roo00541
Biosynthesis of various nucleotide sugars
roo01055
Biosynthesis of vancomycin group antibiotics
roo01100
Metabolic pathways
roo01110
Biosynthesis of secondary metabolites
roo01250
Biosynthesis of nucleotide sugars
Module
roo_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G5S37_24270
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G5S37_24270
01055 Biosynthesis of vancomycin group antibiotics
G5S37_24270
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G5S37_24270
00525 Acarbose and validamycin biosynthesis
G5S37_24270
Enzymes [BR:
roo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G5S37_24270
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QIF04510
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Position
complement(6044621..6045574)
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AA seq
317 aa
AA seq
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MSQKKTAVVTGAAGFLGSHLSDRLLGEGYKVIGMDNLLTGNVRNIEHLAGNPDFDFIKHD
VTKFIYLPGKVDLIFHFASPASPIDYLQIPIQTLKVGSLGTHNALGLAKEKGATFLIAST
SECYGDPLEHPQKETYWGNVNPVGPRGCYDEAKRFAEAITMAYHRFHNLDTKIVRIFNTY
GPRMRLEDGRVVPAFIGQSLQGNDLTVFGDGSQTRSFCYVSDLIDGIYKLSQSTYHEPCN
IGNPGEMTVLQFAEKILKVTGSKSKIDFRPLPVDDPKVRQPDITLAKRILGWEPKVSFDE
GIDKTVAYFRDFLGIHA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaaaaaaccgccgttgtcactggagccgccgggttccttgggtcccatctt
tccgaccgccttttgggggaggggtacaaggtgattggcatggacaatctcctgacgggc
aacgtgcgcaacatcgagcacctcgctgggaatccggatttcgacttcatcaagcatgac
gtcacgaaattcatctacctgccaggcaaggtggatctgattttccacttcgcgtccccg
gcctcacccatcgactaccttcagattcccatccagacactgaaggtgggatcactgggc
acgcacaatgcgctcggcttggcgaaggagaagggcgctacattcctaattgccagcacc
agcgaatgctacggtgatcctctggagcacccgcagaaggagacgtactggggcaacgtg
aacccggtgggaccgcggggttgttacgatgaggcgaagcgttttgccgaggccatcacg
atggcctatcaccgctttcacaatctggacaccaagattgtccgcattttcaacacctac
gggccacgcatgcgcctggaggacgggcgcgtggtgccggctttcattggccagtccctg
cagggcaacgacctcaccgtattcggcgatggttcccagacgcgcagcttctgctacgtg
agcgacctcattgacggcatctacaagctctcccagagcacgtaccatgagccgtgcaat
atcggcaatcccggcgagatgaccgtgctgcagttcgccgagaaaatcctgaaggtcacg
ggcagcaagtcgaaaatcgatttccgcccactgccggtggacgatccgaaggtgcgccag
ccggatatcacgctcgccaagcgcattcttggctgggagccaaaggtttcctttgatgag
ggcattgataagactgtcgcttactttcgcgactttctgggaatccacgcttga
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