Roseimicrobium sp. ORNL1: G5S37_24475
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Entry
G5S37_24475 CDS
T06460
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo03420
Nucleotide excision repair
roo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5S37_24475
03430 Mismatch repair
G5S37_24475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roo03400
]
G5S37_24475
Enzymes [BR:
roo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G5S37_24475
DNA repair and recombination proteins [BR:
roo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5S37_24475
MMR (mismatch excision repair)
Other MMR factors
G5S37_24475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
AAA_22
ResIII
ATP-synt_ab
NAT10_TcmA_helicase
DEAD
Motif
Other DBs
NCBI-ProteinID:
QIF04550
LinkDB
All DBs
Position
complement(6131793..6133799)
Genome browser
AA seq
668 aa
AA seq
DB search
MSFSYALLNLQQRDAVQTIHGPVLILAGAGTGKTRVITMRIANMVEQGISPENIVSVTFT
NKAASEMRERITEILGKEKAKKLTLGTFHAFCMRLLRQHAEALGYKNNFTIYSQGEQISL
VKKILARLLVKEESCDPTMALSRISKAKNAGVSLGDPMETVDGALQQLYTDELRAMNAMD
FDDLLLNGVKLLEDHPEVRDAVQGKLRYVMVDEFQDTNTLQMRLLRALVPPPHNICVVGD
DDQSIYGWRGADITNINEYESFFPDPKIIKLEENYRSTTPILHTANSLIRNNVGRRDKSL
WSRNTGQDPVRLVVTEDEKEEAALIADEMTDAQTKGEKWDDMAVLFRTNEQSRVLEGEFR
KRKIPYRIIGARSFFDRREVKDILAYLTVLANPDDDVSLQRILNTPTRGIGAATAELARE
HSIKKRTSVFAALKDPEFLENISQRLQLVINGFVETIESFRGQAHQPLQPLQPLAEKLVA
EIRYMDYLEKQAKTPEDFETWKNGIKMIMQSLTGYDERAKGEGLQGFLDETSLNDDREEK
EDITKKTGVCLITLHASKGLEFPYVWLPGMEEGILPHKRSIDENRKDEERRLFYVGITRA
MRKLTISHTRYRVKWGQKQTCMASSFLQELDRQYVEEFDHAAYMNEDLEADDAADFMAAM
RRQLMNEA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttcctacgcacttctcaacctccagcaacgtgatgctgtccagaccattcat
ggtcctgtcttgattctcgccggtgccggcaccggcaagacgcgtgtgatcaccatgcgc
attgccaacatggtggagcagggcatttcgcctgagaacattgtgtccgtgaccttcacg
aacaaggccgcgagtgaaatgcgcgagcgcatcaccgagatcctcggcaaggagaaggca
aagaagctgacgctggggaccttccacgccttctgcatgcgcctgctgcgtcagcatgcg
gaagcgctgggctacaagaacaacttcaccatctacagccagggtgagcagatcagcctg
gtgaagaagattctcgcgcgcctcctggtgaaggaggaaagctgcgacccgaccatggca
ctcagccgcatcagcaaggcgaagaatgccggcgtcagcctgggggatcccatggagacg
gtggatggcgcgctgcagcagctctacaccgatgagctgcgcgcgatgaacgcgatggac
ttcgatgacctcctgctcaacggcgtgaagctgctggaggaccatcctgaagtgcgcgat
gccgtgcagggcaagctgcgctacgtgatggtggatgaattccaggacacgaacaccctg
cagatgcgcctcctgcgcgcgctcgtgccaccgccgcacaacatctgcgtggtgggtgat
gacgaccagagtatctacggctggcgtggtgcggacatcaccaacatcaacgagtacgaa
tccttcttccccgatccgaagatcatcaagctggaggagaactaccgcagtaccacgccc
atcctgcacacggcgaacagcctgatccgcaacaacgtgggccgccgtgacaagtccctc
tggagccgcaataccggccaggatcccgtgcgactcgtggtgacggaggatgagaaggaa
gaagcggcgctcatcgcggacgaaatgacggacgcgcagactaagggcgagaagtgggat
gacatggcggtgctcttccgtacgaacgagcagagccgcgtgctggaaggtgaattccgc
aagcgcaagatcccataccgcatcatcggtgcacgcagcttcttcgatcgtcgtgaggtg
aaggacatcctcgcttacctcaccgtgctggcgaatccggatgatgatgtgagcttgcag
cgtatcctgaatacgcccacgcgtggcatcggcgccgcgactgcggagctggctcgtgaa
cactccatcaagaagagaacaagtgtctttgccgcgctgaaggatccggagttcttggag
aacatctcccaacgccttcagttggtgatcaatggatttgtggagaccatcgagagcttc
cgtgggcaggcgcaccagccgctgcaacccctgcagccgttggccgaaaaactcgtcgcc
gagatccggtacatggactacctggagaagcaggcgaagacgccggaagacttcgagacc
tggaaaaacgggatcaagatgatcatgcagtcgctcaccggctatgatgagcgcgccaaa
ggcgagggcctgcagggcttcctggatgagaccagcctcaacgatgatcgtgaggagaag
gaggacatcaccaagaagaccggcgtgtgcctgatcacgcttcatgcttccaagggactg
gagttcccctacgtgtggctgcccggcatggaggagggcatcctccctcacaagcggtcc
atcgatgagaaccgcaaggatgaggagcgtcgtcttttctacgtgggcatcacgcgagcc
atgcgcaagctgaccatcagccacacccgctaccgtgtgaagtggggccagaagcagacc
tgcatggctagcagtttccttcaggaactggatcgccaatacgtggaggagttcgaccac
gccgcctacatgaatgaggatctggaggcggacgacgccgccgatttcatggccgcgatg
cgtcggcaattgatgaacgaggcgtag
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