KEGG   Roseimicrobium sp. ORNL1: G5S37_30605
Entry
G5S37_30605       CDS       T06460                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
roo  Roseimicrobium sp. ORNL1
Pathway
roo00521  Streptomycin biosynthesis
roo00523  Polyketide sugar unit biosynthesis
roo00525  Acarbose and validamycin biosynthesis
roo00541  Biosynthesis of various nucleotide sugars
roo01055  Biosynthesis of vancomycin group antibiotics
roo01100  Metabolic pathways
roo01110  Biosynthesis of secondary metabolites
roo01250  Biosynthesis of nucleotide sugars
Module
roo_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:roo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    G5S37_30605 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    G5S37_30605 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    G5S37_30605 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    G5S37_30605 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    G5S37_30605 (rfbB)
Enzymes [BR:roo01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     G5S37_30605 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short KR NAD_binding_10 NmrA Pfc11_Clp1_ID
Other DBs
NCBI-ProteinID: QIF05668
UniProt: A0A6G6KE08
LinkDB
Position
complement(7562386..7563471)
AA seq 361 aa
MAAADRRILVTGGAGFIGSNLVHYLLGEAGADHGVTVSKVVNLDKLTYAGNRSSLAKLEG
DARHVFVEGDIQDAELFAKLLKEHDINAVMHLAAESHVDRSIDSPEEFIFTNFVGTFRLL
HTALQHHRERQKEGKDDFRFLHVSTDEVFGSLSPTDPAFSETTPYAPNSPYSASKAGSDH
LARAYVHTYKMPLVTTNCSNNYGPFQFPEKLMPLMIQKVLRGEKLPVYGDGTNVRDWLYV
EDHCRGLTLALLKGEIGETYNIGGKCEMKNIDVVHAIIAAVNAERPDLKRDPKELITFVK
DRPGHDRRYAIDCSKIGRELGWEPRETFDSGMRKTVRWYLDNSEWINEIERKYQLQRLGQ
G
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggcagcagcagacaggcgcattctcgtcaccggcggcgcgggcttcatcggctcgaac
ctcgttcattacctcctcggcgaagccggcgcggatcatggtgtcaccgtcagcaaggtg
gtgaatctggacaaactcacctacgcgggcaaccgcagcagcctcgccaagctcgagggt
gatgcacgccatgtgttcgtggagggagacatccaggacgccgaactcttcgcgaagctg
ctcaaggaacatgacatcaatgccgtcatgcacctcgccgccgagtcgcatgtggaccgc
tccatcgattccccggaagagttcatcttcaccaatttcgtgggcaccttccgcctgctt
cataccgctctgcagcatcaccgcgagcgtcagaaggagggcaaggatgacttccgcttc
ctccatgtcagcaccgacgaagtgttcggctccctgagcccgacggatcccgccttcagc
gagaccacgccctacgcgccgaacagtccctactccgccagcaaggccggcagcgaccac
ctcgcgcgcgcctatgtacacacgtacaagatgccgctggtcaccacgaactgctcgaac
aactacggccccttccagttccctgagaagctcatgccgctcatgatccagaaagtactt
cgtggagaaaaactccccgtgtacggcgacggcaccaacgtgcgcgactggctctatgtg
gaagaccattgccgtggcctcacgctagccctgctcaagggcgaaatcggtgagacctac
aacatcggcggcaagtgtgagatgaagaacatcgacgtcgtgcacgccatcatcgccgca
gtgaacgccgagcgccccgacctcaagcgcgacccgaaggaactcatcacgtttgtgaag
gatcgtcccggtcacgatcgccgctacgccattgattgcagcaagatcggccgtgaactc
ggctgggagccgcgggagacgttcgacagcggcatgcgcaaaacggtccgctggtatctc
gacaactctgagtggattaacgagatcgagcgcaagtatcagctccagcggctcggccag
ggctaa

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