Rhodococcus opacus B4: ROP_07190
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Entry
ROP_07190 CDS
T00882
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03030
DNA replication
rop03410
Base excision repair
rop03420
Nucleotide excision repair
rop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ROP_07190 (polA)
03410 Base excision repair
ROP_07190 (polA)
03420 Nucleotide excision repair
ROP_07190 (polA)
03440 Homologous recombination
ROP_07190 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rop03032
]
ROP_07190 (polA)
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_07190 (polA)
Enzymes [BR:
rop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ROP_07190 (polA)
DNA replication proteins [BR:
rop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ROP_07190 (polA)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ROP_07190 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROP_07190 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
BAH48966
UniProt:
C1AT34
LinkDB
All DBs
Position
complement(750769..753513)
Genome browser
AA seq
914 aa
AA seq
DB search
MSPATTPRSTTSPASGAAAPSDDRPTLMLLDGHSLAFRAFYALPAENFKTHSGQVTNAVY
GFTSMLINLLRDEQPTHVAAAFDVSRQTFRAEKFPEYKANRSKAPDEFKGQVEITKDVLG
ALGIPVMAEEGFEADDIIATLTTQAEALGYRVLVVTGDRDSLQLVTDGVTVLYPKKGVSD
LTRFTPAAVEEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWIKEYGDLVGLVD
NVDKVRGKVGDALRENLPNVLLNRELTEMVRDVPLPYTPDQLMLAQWDREKIHALFDDLE
FKVLRDRLFATLAPVEAEAEEGFEVRGSALEPGAVADWLSLHASTGERSGVSVVGTRTPY
GGDVTAIAVAAADGEGAYIATASATPEDEKALGDWLADAEQPKALHEAKWAMHALRGRGW
VLGGLTSDTALAAYLVRPGQRTFNLDDLSLRYLRRELRVEETGQEQLSLLDDADQVDAEA
AETEILSARAVLDLAAALDTELDNIESTALLSEMELPLLEVLAVIEASGIAVDGTHLHDL
QSRFAAEVSEAAEAAYGVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDAEALQN
LFEKTSHPFLEHLLAHRDATRLKVTVDGLLKTVAEDGRIHTTFNQTVAATGRLSSTEPNL
QNIPVRTDAGRQIRDGFVVGEGYDSLLTADYSQIEMRIMAHVSGDAGLIEAFNTGEDLHS
FVGARAFGVPIEEVTPELRRRVKAMSYGLAYGLSAFGLAAQLKISTEEAKSQMEAYFARF
GGVRDYLHEVVEQARKDGYTSTLYGRRRYLPDLTSDNRQRREVAERAALNAPIQGTAADI
IKVAMINVQRSLREAGLKSRMLLQVHDELVLEVVDSEREQVEQLVRDKMSSAIELSVPLD
VSVGTGRSWDAAAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgcaaccaccccccggtccaccacgtcccccgcgtccggcgcagccgcgccg
tccgacgatcgccccaccctgatgctgctcgacggccattctctggccttccgggcgttc
tacgccctgcccgccgagaacttcaagacgcacagcggtcaggtcaccaacgccgtctac
gggttcacgtcgatgttgatcaacctcctgcgcgacgaacagcccacccatgtggcggcg
gcgttcgacgtgtcgcggcagacgttccgggccgagaagttccccgagtacaaggccaat
cgcagcaaggccccggacgagttcaaggggcaggtcgagatcaccaaggacgtcctcggg
gccctcggcatcccggtgatggccgaggaaggcttcgaggccgacgacatcatcgccacg
ctcaccacccaggccgaggcgctcggctaccgcgtcctcgtggtgaccggcgaccgggac
tcgctccaactggtcaccgacggggtgacggtgctctacccgaagaagggcgtctcggac
ctcacccggttcacgccggcggcggtcgaggagaagtacgggctcacacctgcgcagtac
cccgacttcgcggcgctgcgcggcgacccgagcgacaacctgccgggtatccccggggtg
ggggagaagaccgccaccaagtggatcaaggagtacggcgatctcgtcggcctggtcgac
aacgtcgacaaggttcgcggcaaggtcggagacgcgttgcgggagaacctgccgaacgtc
ctgctcaaccgtgagctgaccgagatggtgcgcgacgtccccctgccgtacaccccggac
cagctgatgctggcgcagtgggaccgggagaagatccacgcgctgttcgacgacctcgag
ttcaaggtgctgcgcgaccggctgttcgccacgctcgcccccgtcgaagccgaggcggag
gagggtttcgaggtgcgcggcagtgcgctcgaaccgggtgccgtcgcggactggctgtcg
ttgcacgcgtcgacgggcgagcgttccggtgtgtcggtggtcggcactcgcaccccgtac
ggcggcgacgtgacggcgatcgccgtcgcggccgccgacggcgagggcgcgtacatcgcc
accgcgtccgccaccccggaggacgagaaggcactcggcgactggctcgcggacgcggag
cagccgaaggcgctgcacgaggccaagtgggcgatgcacgcgctccgcggccgcggctgg
gtgctcggcggtctcaccagcgacaccgcgctggccgcctacctggtgcgccccgggcag
cggacgttcaacctcgacgacctgtcgttgcggtacctgcgcagggagctgcgggtggag
gagaccggccaggagcagctgtcgctgctcgacgacgccgaccaggtcgacgcggaagcc
gccgagaccgaaattctcagcgcccgcgccgtcctcgacctcgcggccgcgctcgacacc
gaactcgacaacatcgaatcgacggctctgctgtcggagatggagctgccgctgctggag
gtgctggccgtcatcgaggcgtccggtatcgccgtcgacggcacccacctgcacgacctg
cagagccggttcgcggccgaggtgtccgaggcggcggaggcggcctacggggtcatcggc
aagcagatcaacctcgggtcacccaagcagttgcaggtcgtgctgttcgacgagctggag
atgcccaagacgaagaagacgaagaccgggtacaccacggacgccgaggcgttgcagaat
ctgttcgagaagacgtcgcacccgttcctcgagcacctgctcgcgcaccgcgacgcgacg
aggctgaaggtgacggtcgacggcctgctgaagacggtcgccgaggacggccgcattcac
acgacgttcaaccagaccgtcgcggccaccggccggctgtcgtccaccgagcccaacctg
cagaacatcccggtgcgcacggatgcgggccggcagatccgggacggtttcgtcgtcggc
gagggctacgactccctgctcaccgccgactacagccagatcgagatgcggatcatggcc
cacgtgtccggcgacgcggggctgatcgaggcgttcaacaccggcgaagacctgcacagt
ttcgtcggtgcccgcgcgttcggcgtgccgatcgaggaggtcacacccgaactgcgccgc
cgcgtgaaggcgatgtcctacgggctggcgtacgggctgagcgcgttcggtctggctgcg
cagctcaagatctcgaccgaagaggccaaatcgcagatggaggcgtacttcgcccggttc
ggcggggttcgcgactacctgcacgaggtcgtggaacaggcccgcaaggacggctacacg
tcgacgctgtacgggcgccgccgctaccttcccgacctcaccagcgacaaccgtcagcgt
cgcgaggtcgccgagcgcgccgcgctcaacgccccgatccagggcacggccgccgacatc
atcaaggtcgcgatgatcaacgtgcagcgctcactgcgcgaggcgggtctgaagtcgcgg
atgctgctccaggtccacgacgaactcgtgctcgaggtcgtcgattcggagcgggaacag
gtcgaacagctggtccgcgacaagatgtcctcggccatcgagctgtcggtgccgctggac
gtgtccgtcggcaccggccgcagttgggacgccgccgcacactag
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