Rhodococcus opacus B4: ROP_07840
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Entry
ROP_07840 CDS
T00882
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00500
Starch and sucrose metabolism
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
ROP_07840 (glgX)
Enzymes [BR:
rop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
ROP_07840 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
BAH49031
UniProt:
C1AU23
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Position
815831..818104
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AA seq
757 aa
AA seq
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MEASESTGTTPIPVWPGSAYPLGATYDGAGTNFSLFSEVAEAVDLCLIAKDGTETRVRLD
EVDGYVWHAYLPTVVPGQRYGYRIHGPWDPSAGHRCDPSKLLLDPYGKAFDGEFDGDRSL
FSYDIDASAESAPEESGDEESGDDALIVDTDDDIEAEDAADALTVEAEEDSAPGLPGHDS
LGHTMTTVVINPFFDWAADRAPKHPYHDTVIYEAHVKGMTATHPGVPEELRGTYAGLAHP
VIIDHLVDLGVTAIELMPVHQFMHDQTLLDKGLRNYWGYNTFGFLAPHTGYSSAEKPGAA
VSEFKAMVRSFHEAGIEVILDVVYNHTAEGNHLGPTISFRGIDNAAYYRLVDGDAEHYMD
YTGTGNSLNARHPHTLQLIMDSLRYWVTEMHVDGFRFDLASTLARELHDVDRLSAFFDLV
QQDPIVSQVKLIAEPWDIGEGGYQVGNFPGLWTEWNGKYRDTVRDYWRGEPATLGEFASR
LTGSSDLYEATGRRPGASINFVIAHDGFTLHDLVSYNEKHNEANGEDNNDGESHNRSWNC
GVEGPTDDPEILDLRGRQSRNILATLLLSQGTPMLAHGDEMGRTQQGNNNVYCQDSELSW
MDWSLADSNADLVEFTKRVIALRMKNPVFRRRRFFEGTPIRSGDQTRDIAWLTPSGEEMT
PEDWDSGFGKSLAVFLNGEGIPEPNHRGERVVGDSFLLCFNAHDEEIEFSTPNSDYADEW
AVVLDTAVPTGAKEAVIKAGNSLQVESRSLVVLRRTA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagcgagtcgaccggcaccacgcccattcccgtgtggcccggcagcgcctac
ccactgggcgccacctacgacggggcagggacgaacttctccttgttttccgaggtcgcc
gaggcggtcgatctgtgcctgatcgcgaaggacggcacggagacgcgggtgcgcctcgac
gaggtcgacggctacgtgtggcacgcgtacctgccgaccgtcgtgcccgggcagcggtac
gggtaccggatccacggcccgtgggatccgtcggccgggcaccgctgcgaccccagcaag
ctgctcctcgacccctacggcaaggcgttcgacggcgagttcgacggcgaccggtccctg
ttctcctacgacatcgacgcgtccgccgagtccgccccggaggaatccggcgacgaagaa
tccggggacgacgccctgatcgtcgacacggacgacgacatcgaggcggaggacgccgcg
gacgcactcacagtggaagccgaggaagactcggccccgggactgcccggacacgattcg
ctcggccacacgatgacgacggtcgtgatcaacccgttcttcgactgggccgcagaccgc
gcaccgaaacacccctaccacgacacggtgatctacgaggcccacgtcaagggcatgacg
gcgacgcatcccggtgtgccggaagaacttcgcggcacgtacgcgggcctcgcgcatccg
gtgatcatcgaccacctcgtcgacctcggcgtcaccgcgatcgaactgatgccggtgcat
cagttcatgcacgatcagaccctgctcgacaaggggctgcggaactactggggttacaac
acgttcggcttcctggccccgcacaccgggtattcgtcggcggagaagccgggcgccgcg
gtgtcggagttcaaggctatggtccgctcgttccacgaggcgggcatcgaggtgatcctc
gacgtggtctacaaccacaccgccgagggcaaccatctcggtccgaccatctcgttccgc
ggcatcgacaacgccgcctactaccggctcgtcgacggcgacgccgagcactacatggac
tacacgggcacggggaacagcctcaacgcccggcacccgcacacgctgcagctgatcatg
gactcgctgcggtactgggtcaccgagatgcacgtcgacggattccggttcgatctcgcg
tcgacgctcgcccgcgaactgcacgacgtcgaccggctctccgcgttcttcgacctcgtc
cagcaggatccgatcgtcagccaggtcaagctcatcgccgaaccctgggacatcggcgag
ggcggttaccaagtgggcaacttccccggactgtggacggagtggaacggcaagtaccgc
gacacggtccgcgactactggcgcggcgaaccggcgacgctcggcgagttcgcgtcccgg
ctcaccggctcctccgacctctacgaggccaccggacgccgccccggcgcgagcatcaac
ttcgtcatcgcccacgacgggttcaccctgcacgacctcgtgtcgtacaacgagaagcac
aacgaagccaacggcgaggacaacaacgacggcgagagccacaaccggtcctggaactgc
ggggtcgagggcccgacggacgacccggagatcctcgatctgcgcgggcggcagagccgc
aacatcctggccacccttctgctcagccagggcacgccgatgctggcgcacggggacgag
atgggccgcacccagcagggcaacaacaacgtgtactgccaggactcggaactgtcgtgg
atggactggtcgctggccgactccaacgccgacctcgtcgagttcaccaaacgggtgatc
gcactgcggatgaagaatccggtgttccgtcgccgccggttcttcgagggcacccccatc
cgcagcggtgaccagacccgcgacatcgcctggctcaccccgtccggtgaggagatgacc
cccgaagactgggacagcggtttcgggaagtcgctcgcggtgttcctcaacggcgagggc
atccccgaacccaaccatcgcggggagcgggtggtcggcgactccttcctgctgtgtttc
aacgcgcacgacgaggagatcgagttctccacgccgaactccgattacgccgacgagtgg
gcggtcgtgctcgacaccgccgtgccgacgggcgcgaaggaagcggtgatcaaggcgggg
aattcgctgcaggtcgagtcccggtcgctggtcgtgctgcgccggaccgcctga
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