Rhodococcus opacus B4: ROP_08340
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Entry
ROP_08340 CDS
T00882
Symbol
crtE
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00900
Terpenoid backbone biosynthesis
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ROP_08340 (crtE)
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
ROP_08340 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rop01006
]
ROP_08340 (crtE)
Enzymes [BR:
rop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ROP_08340 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ROP_08340 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
ROP_08340 (crtE)
Prenyltransferases [BR:
rop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ROP_08340 (crtE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAH49081
UniProt:
C1AU73
LinkDB
All DBs
Position
873023..874180
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AA seq
385 aa
AA seq
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MVVSTPVARRRSRREREISILEATLSVGTRPAALAAEVENALREFFTSRQALVDAVGGGY
REAVTTLEDFVLRGGKRVRPAFAWTGWLGAGGDPRGPGAGPVLRACSALELVQACALVHD
DIIDASTTRRGFPTVHVEFEEQHRAGRWSGDSAHFGEGVAILLGDLALAWADDMIRESGI
TPDQSARISPVWSAMRTEVLGGQFLDISNEVRADESIDAAMKVNRYKTAAYTIERPLHLG
AALAGADDSLVSAYRRFGTDIGIAFQLRDDLLGVFGDPAVTGKPSGDDLRAGKRTALFAM
SLQRADAEDPAAAALLREGIGTDLSDADVDTLRNMITSLGAVADVEKQIEDLVANALSTL
ATSTATTAAKQQLTEMAVAATRRDY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgtcgacgcccgtcgcccgtcgccggtctcggcgcgaacgcgaaatttcgatc
ctggaggccacactgtccgttggaacgcgccccgccgccctcgcggccgaggtcgaaaat
gcgctgcgcgagttcttcaccagccggcaggccctggtcgacgccgtgggcggcggctac
cgcgaggccgtgacgacgctggaggacttcgttcttcgcggaggcaagcgggtccgtccg
gccttcgcgtggaccggctggctcggggcgggcggcgaccctcggggtcccggggccggg
cccgtgctccgcgcctgctccgcgctggaactcgtgcaggcctgcgccctcgtccacgac
gacatcatcgacgcctccacgacgcgccgcgggttccccaccgtccacgtcgagttcgag
gaacagcaccgcgccgggaggtggagcggtgattccgcccacttcggcgagggcgtcgcc
atcctcctcggcgacctcgcgctggcctgggccgacgacatgatccgcgaatcgggcatc
accccggatcagtcggcccgcatctcccccgtgtggtcggcgatgcgcaccgaggtgctc
ggcgggcagttcctcgacatcagcaacgaggtgcgggcggacgagtcgatcgacgccgcc
atgaaggtcaaccggtacaagaccgcggcgtacaccatcgagcggccgctgcacctcggc
gccgcactcgccggcgccgacgactccctggtctcggcgtaccgccgattcggcaccgac
atcggtatcgccttccagctccgcgacgacctgctgggcgtgttcggggatccggccgtg
accggcaagccgtcgggcgacgacctgcgggcgggcaagcgcaccgccctgttcgcgatg
tcgctgcagcgggccgacgccgaagacccggcggccgccgcactgctccgcgagggcatc
ggcaccgacctgtccgacgcggacgtcgacaccctccggaacatgatcacgtccctcggc
gccgtcgcggacgtggagaagcagatcgaggacctcgtcgcgaacgcgctgtcgacgctg
gcgacgagcaccgccaccaccgcggcgaagcagcagctcaccgagatggccgtcgccgcg
acgcgccgcgactactga
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