Rhodococcus opacus B4: ROP_09460
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Entry
ROP_09460 CDS
T00882
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rop
Rhodococcus opacus B4
Pathway
rop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ROP_09460 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_09460 (recO)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ROP_09460 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ROP_09460 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF3724
DUF7573
Motif
Other DBs
NCBI-ProteinID:
BAH49193
UniProt:
C1AUI5
LinkDB
All DBs
Position
complement(987934..988749)
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AA seq
271 aa
AA seq
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MRLYRDNAVVLRQHKLGEADRIVTLLTRQHGLVRAVAKGVRRTKSKFGARLEPFAHIDVQ
LYPGRNLDIVTQVQTVDAFATDIVDDYTRYTTACAILETAERLAGEERAPALQLHRLTVG
ALRAVAEHHRPCELILDAFLLRAMGFAGWAPALDDCARCSAPGPHRAFHVAAGGAVCVQC
RPPGAATPSPGVLDLMDALFRGDWASTEQVPEWLRGQASGLVAAHLQWHLERQLRTLPLI
ERARPHAAVGVEDSVRQDGDRDSTTRTPSSA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttgtatcgagacaatgcggtggtcctgcgccagcacaagctgggcgaggccgac
cgtatcgtcacactcctcacccggcagcacggtctggtgcgcgcggtcgccaagggggtg
cgccgcacgaaatccaagttcggtgcccggctcgagccgttcgcgcacatcgacgtgcag
ctgtacccgggccgcaacctcgacatcgtcacccaggtccagacggtcgacgcgttcgcg
accgacatcgtcgacgactacacccgctacaccacggcgtgcgcgattctcgagaccgcc
gagcggctcgccggtgaggaacgggccccggcgctgcaactgcaccgcctgacggtcggg
gcgctgcgggccgtcgcggaacaccaccggccgtgcgagctgatcctggacgccttcctg
ttgcgggccatgggttttgcggggtgggcgcctgccctcgacgactgcgcccggtgcagc
gcgcccggcccgcaccgggcattccacgtggccgccgggggagcggtgtgcgtccagtgc
cggccgccgggcgccgccaccccgtcgccgggcgtcctcgacctgatggatgcgctgttc
cgcggcgactgggcgagcacggagcaggtgccggagtggttgcgggggcaggccagcggc
ctggtcgcggcgcatctgcagtggcatctcgaacggcagctccgcacgctcccgctgatc
gaacgcgcccgaccgcatgcggcggtaggggtggaggattcggtcaggcaggatggggac
cgtgattcgacgacgcgaaccccgagctccgcataa
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