Rhodococcus opacus B4: ROP_10560
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Entry
ROP_10560 CDS
T00882
Symbol
pcaF
Name
(GenBank) putative beta-ketoadipyl-CoA thiolase
KO
K00626
acetyl-CoA C-acetyltransferase [EC:
2.3.1.9
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00071
Fatty acid degradation
rop00280
Valine, leucine and isoleucine degradation
rop00310
Lysine degradation
rop00362
Benzoate degradation
rop00380
Tryptophan metabolism
rop00620
Pyruvate metabolism
rop00630
Glyoxylate and dicarboxylate metabolism
rop00650
Butanoate metabolism
rop00720
Other carbon fixation pathways
rop00900
Terpenoid backbone biosynthesis
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01120
Microbial metabolism in diverse environments
rop01200
Carbon metabolism
rop01212
Fatty acid metabolism
rop02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
ROP_10560 (pcaF)
00630 Glyoxylate and dicarboxylate metabolism
ROP_10560 (pcaF)
00650 Butanoate metabolism
ROP_10560 (pcaF)
09102 Energy metabolism
00720 Other carbon fixation pathways
ROP_10560 (pcaF)
09103 Lipid metabolism
00071 Fatty acid degradation
ROP_10560 (pcaF)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ROP_10560 (pcaF)
00310 Lysine degradation
ROP_10560 (pcaF)
00380 Tryptophan metabolism
ROP_10560 (pcaF)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ROP_10560 (pcaF)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ROP_10560 (pcaF)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ROP_10560 (pcaF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_10560 (pcaF)
Enzymes [BR:
rop01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.9 acetyl-CoA C-acetyltransferase
ROP_10560 (pcaF)
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
ROP_10560 (pcaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thiolase_N
Thiolase_C
ketoacyl-synt
Motif
Other DBs
NCBI-ProteinID:
BAH49303
UniProt:
C1AVM3
LinkDB
All DBs
Position
1102582..1103793
Genome browser
AA seq
403 aa
AA seq
DB search
MRDVVICEPLRTPVGRFGGVFKDLTPQNLAATVITALVERTGIDGSQIDDVILGQASPGG
EAPAIGRIAALDAGLGIDVPGMQVDRRCGSGLQAVITAVLQVASGGNDLVLAGGAESMSQ
AEFYTNPNIRWGVKGEGVQLADRLARARVTAGGANFPVPGGMIETAENLRAEFDISREDQ
DALAVQSHQRAVAAQESGRFAEEIVGVTVPQRKSDPLVVDRDEHPRADTTVESLSKLRAI
RAKIDSASTVTAGNASGQNDGAAVCIVTTAEKAKELGLKPLARMASWAVAGVPPRTMGIG
PVPATEKALGQLGLSLSDMGVIELNEAFAAQTLAVLRSWDLDPTDERLNPNGSGISLGHP
VGATGGRILATLLREMDRRESRYGLETMCIGGGQGLAAVFERV
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgacgtcgtcatctgcgagcccctccggacgccggtcgggcgattcggtggagtg
ttcaaggacctcacaccccagaacctcgccgccaccgtcatcacggcgctcgtcgaacgc
accggcatcgacggtagccagatcgacgacgtcatcctcggtcaggcgtcccccggcgga
gaggccccggccatcggccggatcgccgctctcgacgccggactcggcatcgacgtcccc
ggcatgcaggtggatcgccgctgcggatccggtctacaggctgtcatcaccgccgtgctg
caggtggcgtccggcggcaacgacctcgtgctcgccggcggcgccgaatccatgagccag
gccgagttctacaccaacccgaacatccgctggggtgtcaaaggcgaaggggtgcaactc
gccgaccggctcgcccgcgcccgcgtcaccgccggcggcgcgaacttccccgtgcccggc
ggcatgatcgagaccgccgagaacctgcgcgccgaattcgacatcagccgtgaagaccag
gacgccctcgccgtgcagtcgcaccagcgtgccgtcgccgcacaggaatcgggtcgcttc
gccgaggagatcgtcggagtgacggtgccgcaacgcaagtcggacccgctcgtcgtcgac
agggacgagcacccgcgcgccgacaccacggtggagtcgctgtcgaagctccgcgccatc
cgcgcgaagatcgactccgcctccaccgtcaccgccggcaacgccagcggccagaacgac
ggcgccgccgtgtgcatcgtgacgaccgccgagaaggcgaaggaactgggtctgaagccc
ctcgcccggatggcgtcctgggccgtggccggcgtcccgccgcgcaccatgggcatcggc
ccggtgcccgcgacggagaaggccctcggccagctcggactgtcgctgtccgacatggga
gtcatcgaactgaacgaggccttcgccgcgcagaccctcgccgtcctccgcagctgggac
ctcgaccccaccgacgaacgcctcaaccccaacggatccggcatctccctcgggcaccct
gtcggcgccaccggcggtcgcatcctcgccaccctccttcgggaaatggaccgtcgcgag
tcccgctacgggctcgagaccatgtgcatcggcggcggccagggcctcgccgcggtgttc
gagcgggtctga
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