Rhodococcus opacus B4: ROP_12560
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Entry
ROP_12560 CDS
T00882
Name
(GenBank) putative GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rop03000
]
ROP_12560
Transcription factors [BR:
rop03000
]
Prokaryotic type
Helix-turn-helix
GntR family
ROP_12560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
DIP2311-like_C
APCDDC
SAMD1_WH
UspB
PaaX
Motif
Other DBs
NCBI-ProteinID:
BAH49503
UniProt:
C1AW73
LinkDB
All DBs
Position
complement(1328090..1328857)
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AA seq
255 aa
AA seq
DB search
MNRAGAAGMMPVHLRDSVIPKHEQLRAILLHKCTKELQPGDLMTSERKLMQDYGVSRITV
REAIGQLVNEGHLVRVRGKGTFVAHRPVQSKLHLASFTEEMRAQGHKPTTVVLQCEEDAA
PEATAKALRIAPGTSAYHVKRLRLADGEPVSVDDGWYNAALLPGLLDLDLTGSIYRATAD
RYGMPIDRAEQTVSADGASQDIATLLGIKKGAPVMYFDRVSFSGPTPVEHARSWYRSDRY
QLQMEVQGERTQRSV
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagagctggagccgccggcatgatgcccgtacatctacgcgacagcgtgattccg
aagcacgagcaactccgtgccatcctgctgcacaagtgcacgaaggaactccagcccggc
gatctcatgaccagtgaacgaaaactgatgcaggactacggcgtcagtcgcatcaccgtt
cgcgaggcgatcgggcagctcgtcaacgaggggcacctggtgcgggtgcgcggcaagggc
acgttcgtggcgcatcgtccggtgcagtccaagcttcacctggcctcgttcacggaggag
atgcgggcgcaggggcacaagccgacgacggtggtgctgcagtgtgaggaggacgcggct
ccggaggccaccgcgaaggcgctgcggatcgcaccgggcaccagcgcctatcacgtcaaa
cgactgcgactggctgacggggaaccggtcagcgtcgacgacggctggtacaacgcggcg
ctgcttcccggcctgctggatctggacctgaccggctcgatctaccgggccaccgccgac
cggtacggcatgccgatcgaccgggccgagcagaccgtgagcgcagacggggcgagccag
gacatcgcgaccctgctcggcatcaagaagggtgccccggtgatgtacttcgaccgggtg
tccttcagcggccccacgcccgtcgagcacgcccgcagctggtaccggtccgatcgctac
caactgcagatggaagttcagggggagcggactcagcgcagcgtctga
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