| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase beta' subunit
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| KO |
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| Organism |
rop Rhodococcus opacus B4
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:rop00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ROP_16390 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:rop03021]
ROP_16390 (rpoC)
03400 DNA repair and recombination proteins [BR:rop03400]
ROP_16390 (rpoC)
Enzymes [BR:rop01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ROP_16390 (rpoC)
Transcription machinery [BR:rop03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ROP_16390 (rpoC)
DNA repair and recombination proteins [BR:rop03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ROP_16390 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1743813..1747769)
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| AA seq |
1318 aa
MLDVNFFDELRIGLASAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVIVGVDEELRHNELSTLEAEMQVEKKTVADQRDADLEARAQKLEAD
IAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTTFTKLSVKQLIVDELL
YRELVDRYGEYFTGAMGAESIQKLMESFDIDAEAENLRETIRSGKGQKKLRALKRLKVVA
AFQANQNSPMGMVLNAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
AQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYHLTRLDEGATGELA
ASTNEESEQGVYSSPAEAQMAVDRGALVVQAKIKVRLTQQRPPRDIEAELFPEGWNYGDG
WTAETTLGRVLFNELLPADYPFVNEQMPKKRQATIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSISDVLVPPEKAQIMESFEAQADQIEKKYQRGALNKTERNSALVKIWSEA
TDEVGKAMEAHFPDDNPIPMIVKSGAAGNMTQVRSLAGMKGLVTNPKGEFIPRPIKSSFK
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREVDCGTERGIVTTI
AEKQADGSMIRDAHVETSTYARTLAADAVDENGNVIVERGHDLGDPAIDALLEAGITQVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVA
GDDITGGLPRVQELFEARVPKGKAPIADVSGRVQLEDGDRFYKITIVPDDGGEEVVYDKL
SKRQRLRVFKHDDGTERLLADGDHVEVGQQLMEGAADPHEVLRVMGPRQVQIHLVNEVQE
VYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLTERADFEAANRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARAAAYAVPSYDDQYYSPDGFGRNTGAAVPLDDYGFSNDYR |
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| NT seq |
3957 nt +upstreamnt +downstreamnt
gtgctcgacgtcaacttcttcgatgaactccgcattggcctcgccagtgcagaggacatc
cgcaattggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggtaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggttcgccgtgagcgcatgggccacatcgaactggctgccccg
gtcacccacatctggtacttcaagggcgtgcccagccgtctcggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacgtcatcgtcggtgtcgac
gaggaactgcgtcacaacgagctgtccacgctggaagccgagatgcaggtcgagaagaag
accgtcgccgatcagcgcgatgccgacctcgaggcccgcgcacagaagctcgaagccgac
atcgccgagctggaggcggagggcgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctccgtgaccgcgcgcagcgcgagctggatcgtctcgac
gagatctggaccacgttcaccaagctcagcgtcaagcagctcatcgtcgacgaactgctg
taccgcgagctcgtcgaccgctacggcgagtacttcacgggcgcgatgggtgccgagtcg
atccagaagctcatggagagcttcgacatcgacgccgaggccgagaacctccgcgagacc
atccgcagcggcaaggggcagaagaagctccgcgcgctgaagcgtctcaaggtcgtcgcc
gccttccaggccaaccagaactcgcccatgggcatggttctcaacgcagtcccggtgatc
ccgccggagctgcgtccgatggttcagctcgacggtggccgcttcgccacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ctgttcgacaacggccgtcgcggccgtcccgtcacgggtcccggcaaccgcccgctgaag
tccctgagcgacctgctcaagggcaagcagggtcgtttccgtcagaacctgctcggtaag
cgcgtcgactactcgggtcgttccgtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggctctcgagctgttcaagccgttcgtgatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcgcatggtggaacgtcagcgc
gcacaggtgtgggacgtcctcgaagaggtcatcgccgagcaccccgtgctgctgaaccgt
gcaccgacgctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gccattcagctccacccgctcgtgtgtgaggccttcaacgccgacttcgacggtgaccag
atggccgtgcaccttccgctgtccgcggaggcccaggccgaggcgcgcatcctgatgctg
tcgtcgaacaacatcctgtcgcccgcgtcgggtcgaccgctcgccatgccccgtctggac
atggtcaccggtctgtaccacctgacccggttggacgagggtgccaccggcgagctcgcg
gcgtcgacgaacgaagagtcggagcagggcgtgtactcctcgccggccgaggctcagatg
gccgtcgatcgcggtgcgctcgtcgtgcaggcgaagatcaaggtgcggctcacgcagcag
cgcccgccccgtgacatcgaggcggagctgttccccgagggctggaactacggcgacggc
tggacggcggagacgacgctgggtcgcgtgctcttcaacgagctgcttcccgcggactac
ccgttcgtcaacgagcagatgccgaagaagcgccaggcgacgatcatcaacgatctcgcc
gagcgctaccccatgatcgtggtcgcgcagaccgtcgacaagctgaaggacgccggcttc
tactgggccacgcgttcgggtgtcacggtctcgatctccgacgtcctcgtgccgccggag
aaggctcagatcatggagtccttcgaggctcaggccgatcagatcgagaagaagtaccag
cgtggtgctctgaacaagaccgagcgcaacagcgccctggtcaagatctggtccgaggcc
accgacgaggtcggtaaggccatggaggcccacttccccgacgacaacccgatcccgatg
atcgtgaagtccggcgccgccggcaacatgactcaggttcgctcgctcgccggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcgtccgatcaagtcttccttcaag
gaaggcctgaccgttctcgagtacttcatcaacacgcacggtgcccgtaagggtctggcc
gacaccgcgctccgcaccgccgactcgggttacctgacccgtcgtctggtggacgtctcg
caggacgtcatcgtccgcgaggtcgactgtggaaccgagcgcggcatcgtcaccacgatc
gccgagaagcaggccgacggatcgatgatccgcgacgcccacgtggagacgagcacgtac
gcccgcaccctggccgccgacgcggtcgacgagaacggcaacgtcatcgtcgagcgtgga
cacgacctgggcgacccggccatcgacgcgctgctcgaagcgggcatcacgcaggtcaag
gtccgttcggtgctcacctgcaccaccggcaccggcgtctgcgccacctgctacggccgt
tccatggccaccggcaagctcgtcgacatcggtgaggccgtcggtatcgtcgccgcgcag
tccatcggtgagcccggtacccagctgaccatgcgtaccttccaccagggtggtgtcgcc
ggagacgacatcaccggtggtctgccgcgtgttcaggagctgttcgaggcccgcgtcccc
aagggcaaggccccgatcgccgacgtcagcggccgtgtgcagctcgaggacggcgaccgc
ttctacaagatcaccatcgtcccggacgacggtggcgaagaggttgtctacgacaagctc
tcgaagcgtcagcgtctgcgtgtcttcaagcacgacgacggcaccgaacgcctgctggcc
gacggtgaccacgtcgaggtcggtcagcagctcatggaaggtgctgccgatccgcatgag
gtgctgcgtgtcatgggcccccgtcaggtgcagatccacctcgtcaacgaggtccaggag
gtgtaccggagccagggtgtgtcgatccacgacaagcacatcgaggtcatcgtgcgccag
atgctgcgtcgcgtcacgatcatcgactcgggtgcgacggagttcctgcccggttcgctg
accgagcgtgccgacttcgaggcggccaaccgccgggtcgtcgccgagggtggcgagccg
gcagccggacgtccggtgctgatgggtatcaccaaggcatcgctggcgaccgactcgtgg
ctgtctgcggcgtcgttccaggagaccactcgcgtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctgatcggtctgaaggaaaacgtgatcatcggaaagctgatccctgcc
ggtaccggtatcaaccgttaccgcaacatccaggttcagccgaccgaagaggcccgcgct
gccgcgtacgcggttccgtcgtacgacgaccagtactacagcccggacggcttcggccgg
aacaccggtgccgcggtgccgctggacgattacggtttcagcaacgattaccggtag |
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