Rhodococcus opacus B4: ROP_18370
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Entry
ROP_18370 CDS
T00882
Symbol
sigF
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rop03021
]
ROP_18370 (sigF)
Transcription machinery [BR:
rop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ROP_18370 (sigF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR
HTH_Crp_2
DUF7343
HTH_3
MarR_2
HTH_24
HTH_23
GerE
HTH_31
Sigma70_ECF
KORA
HNF-1_N
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
BAH50084
UniProt:
C1B084
LinkDB
All DBs
Position
1945368..1946165
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AA seq
265 aa
AA seq
DB search
MTSHTHSGGHTARWPDEYQDVTALFRQMAALDEDDPRRSRLRDAVVTRCLPLAEHIARRF
DGRGEAHDDLVQVARLGLVNSVDRFDVERGSDFVSFAVPTIMGEVRRHFRDTGWAVRVPR
RMKELHLALSQAVAELSQSLGHAPTVSELAEHLDLEQEEVAQGLLAGNAYQTVSVDNTSS
DRAGELSMVETLGDYDAAMDDVENHETLRPLLQSLPERERTVLMLRFFGNMTQTQIADRV
GISQMHVSRLLAKTLASLRDQLGDA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtcccatactcacagtggggggcacacggcccggtggccggacgagtatcaggac
gtcacagcactgtttcgacagatggcagccctcgacgaggacgacccccggcgcagcaga
ctgcgcgacgccgtcgtgacccgctgcctgccgttggccgagcacatcgcacgccgcttc
gacggccgcggcgaggcgcacgacgacctggtgcaggttgcgcgcctcggcctggtcaac
tccgtggaccggttcgacgtggagcggggatcggacttcgtgtcgttcgccgttcccacc
atcatgggcgaggtccggcggcatttccgcgacaccgggtgggccgtccgggtgccccgc
cggatgaaggaactgcacctcgcgctgagccaggccgtcgccgaactgtcgcagagcctc
ggccacgcccccaccgtcagcgaactcgccgagcacctggacctggaacaggaagaggtg
gcgcagggactcctcgccggcaacgcctaccagaccgtctccgtcgacaacacgtcctcg
gaccgggcgggcgagctgtccatggtggagacgctcggcgactacgacgccgcgatggac
gacgtcgagaaccacgagaccctgcgtcccctgctccagtcgctgcccgaacgggaacgg
accgtcctcatgctgcggttcttcggcaacatgacgcagacccagatcgccgaccgggtc
ggcatctcgcagatgcacgtgtcccgactgctcgcgaagaccctggcgtcgctgcgagat
cagctcggtgacgcgtag
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