Rhodococcus opacus B4: ROP_18580
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Entry
ROP_18580 CDS
T00882
Symbol
lpd
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00010
Glycolysis / Gluconeogenesis
rop00020
Citrate cycle (TCA cycle)
rop00260
Glycine, serine and threonine metabolism
rop00280
Valine, leucine and isoleucine degradation
rop00310
Lysine degradation
rop00380
Tryptophan metabolism
rop00620
Pyruvate metabolism
rop00630
Glyoxylate and dicarboxylate metabolism
rop00640
Propanoate metabolism
rop00670
One carbon pool by folate
rop00785
Lipoic acid metabolism
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01120
Microbial metabolism in diverse environments
rop01200
Carbon metabolism
rop01210
2-Oxocarboxylic acid metabolism
rop01240
Biosynthesis of cofactors
Module
rop_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rop_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rop_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rop_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
ROP_18580 (lpd)
00020 Citrate cycle (TCA cycle)
ROP_18580 (lpd)
00620 Pyruvate metabolism
ROP_18580 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
ROP_18580 (lpd)
00640 Propanoate metabolism
ROP_18580 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROP_18580 (lpd)
00280 Valine, leucine and isoleucine degradation
ROP_18580 (lpd)
00310 Lysine degradation
ROP_18580 (lpd)
00380 Tryptophan metabolism
ROP_18580 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ROP_18580 (lpd)
00670 One carbon pool by folate
ROP_18580 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_18580 (lpd)
Enzymes [BR:
rop01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
ROP_18580 (lpd)
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
ROP_18580 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_3
GIDA
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
Thi4
DAO
Lys_Orn_oxgnase
3HCDH_N
ApbA
AlaDh_PNT_C
2-Hacid_dh_C
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
BAH50105
UniProt:
C1B0A5
LinkDB
All DBs
Position
complement(1970873..1972276)
Genome browser
AA seq
467 aa
AA seq
DB search
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEQKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKLFGISGEASFDFGAAFDRSRKVAEGRVKGIHFLMKKNKIPEYDGKGTFTDAH
TIEVELTKGGTETVTFDNAIISTGSTTKLLPGTSLSKNVVTYEEQIMTRELPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDADVSKEIEKQYKKLGVKVVTGAAVQSID
DDGSKVTVAIKNNKSGETETVVVDKVMQSVGFAPRVEGFGLEKTGVQLTDRGAIGITNTM
QTNVPHIYAIGDVTAKLQLAHVAEAQAVVAAETIGGAETLPIDDYRMMPRATFCQPQVAS
FGLTEQQAKDEGYDVKVATFPFAANGKAHGLGDATGFVKLIADTKYGELIGGHLIGPDVS
ELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacaactgggattgagcactgccatcatcgagcagaagtactggggcggt
gtgtgcctgaacgtgggctgcatcccctcgaaggctcttctccgcaatgccgaactggcg
catctcttcacaaaagaggccaagttgttcggtatctcgggtgaggcgtccttcgacttc
ggcgccgcgttcgaccgcagccgcaaggttgccgagggccgcgtcaagggcatccacttc
ctgatgaagaagaacaagatccccgagtacgacggcaagggcaccttcaccgacgcccac
accatcgaggtcgagctgaccaagggcggcaccgagacggtcacgttcgacaacgcgatc
atctccaccgggtccaccaccaagctgctgcccggcacctcgctgagcaagaacgtcgtc
acctacgaagagcagatcatgacccgggagctgcccggatcgatcctcatcgtcggcgcg
ggcgcgatcggcatggagttcggatacgtcctcaagaactacggggtcgacgtcaccatc
gtcgagttcctcgaccgggcgctgccgaacgaggacgcggacgtgtccaaggagatcgag
aagcagtacaagaagctcggcgtcaaggtcgtcaccggtgccgcggtgcagagcatcgac
gacgacggctccaaggtcaccgtcgcgatcaagaacaacaagtccggcgagaccgagacc
gtggtggtcgacaaggtcatgcagtccgtcgggttcgctccccgcgtcgagggcttcggt
ctcgagaagaccggggtgcagctcaccgaccgcggtgccatcggcatcaccaacacgatg
cagaccaacgtgccgcacatctacgccatcggtgacgtgacggccaagctgcagctcgcg
cacgtcgcggaggcgcaggccgtcgtcgccgcggagaccatcggcggtgcggaaaccctg
ccgatcgacgactaccggatgatgccgcgcgcgacgttctgccagccgcaggtcgcgagc
ttcgggctgaccgagcagcaggccaaggacgagggctacgacgtcaaggtggcgacgttc
ccgttcgccgcgaacggcaaggcgcacggcctcggtgacgccaccggattcgtcaagctg
atcgccgacaccaagtacggcgagctgatcggtgggcacctgatcggccccgacgtctcc
gagttgctgcccgagctgaccctcgcgcagaagtgggacctcacggtcaacgagctggcc
cgcaacgtgcacacccacccgacgctgtccgaggccctgcaggaggccatccacggcctc
gccgggcacatgatcaacttctga
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