Rhodococcus opacus B4: ROP_18630
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Entry
ROP_18630 CDS
T00882
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ROP_18630 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rop03019
]
ROP_18630 (groEL)
03110 Chaperones and folding catalysts [BR:
rop03110
]
ROP_18630 (groEL)
03029 Mitochondrial biogenesis [BR:
rop03029
]
ROP_18630 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_18630 (groEL)
Enzymes [BR:
rop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ROP_18630 (groEL)
Messenger RNA biogenesis [BR:
rop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ROP_18630 (groEL)
Chaperones and folding catalysts [BR:
rop03110
]
Heat shock proteins
HSP60 / Chaperonin
ROP_18630 (groEL)
Mitochondrial biogenesis [BR:
rop03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ROP_18630 (groEL)
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ROP_18630 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
ROP_18630 (groEL)
Exosomal proteins of breast cancer cells
ROP_18630 (groEL)
Exosomal proteins of colorectal cancer cells
ROP_18630 (groEL)
Exosomal proteins of bladder cancer cells
ROP_18630 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAH50110
UniProt:
C1B0B0
LinkDB
All DBs
Position
complement(1977483..1979108)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTVSLLETAKEIDTKEQIAATAGISAGDPSIGELIAEAMDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISAYFATDPERQEAVLEDAYILLVSSKISTVKDLLPLLEKVIQ
SGKPLVIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVIS
EEVGLSLETAGLELLGQARKVVITKDETTIVEGAGDPEAIAGRVSQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQS
APALDDLKLEGDEATGANIVRVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGHGLNASTN
EYGDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAGAPVGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcggggactcaac
gccctcgccgacgcagtcaaggtgacgttgggccccaagggtcgcaacgtcgtgctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgccgagctggtcaaggaggtcgccaagaagacc
gacgacgtcgccggcgacggaaccaccaccgctaccgttctcgcccaggcgctcgtccgt
gagggcctccgcaacgtcgctgccggcgccaacccgctgggtctgaagcgcggcatcgag
aaggccgtcgaggccgtcaccgtgtctctgctcgagaccgccaaggagatcgacaccaag
gagcagatcgctgctaccgctggtatctccgccggcgacccgtccatcggcgagctcatc
gccgaggccatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtccaacacc
ttcggcctgcagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacccggagcgtcaggaagccgtcctcgaggacgcgtacatcctgctc
gtgagctccaagatctccacggtcaaggatctgctgccgctgctggagaaggtcatccag
tccggcaagccgttggtcatcatcgccgaggacgtcgagggcgaagccctgtccaccctg
gtggtcaacaagatccgtggcaccttcaagtccgtggccgtcaaggctcccggcttcggt
gaccgtcgcaaggctcagctcgccgacatcgccatcctcaccggtggcgaggtcatcagc
gaagaggtcggactctccctggagaccgccggactcgagctgctcggccaggcacgcaag
gtcgtcatcacgaaggacgagaccaccatcgtcgaaggcgcgggagaccccgaggccatc
gccggtcgcgtgtcccagatccgcgccgagatcgagaacagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgttgcagtcatcaaggccggc
gctgccaccgaggtggagctcaaggagcgcaagcaccgcatcgaagatgccgtgcgcaac
gccaaggctgccgtcgaagagggcatcgtcgccggtggtggcgtggctctgctgcagtcg
gctcccgcactggacgacctgaagctcgaaggtgacgaggccaccggtgcgaacatcgtt
cgcgtcgccctcgaagcaccgctgaagcagatcgccttcaacgcgggcctcgagcccggc
gtcgttgccgagaaggtgcgcaacctgcccgcaggtcacggcctcaacgcctcgaccaac
gagtacggcgacctgctcgaagccggcatcaacgacccggtcaaggtcacccgctccgcg
ctgcagaacgcagcgtccatcgcggctctgttcctgaccaccgaggccgtcgtcgccgac
aagccggagaaggccggagcgcccgtgggcgacccgaccggcggcatgggcggtatggac
ttctaa
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