Rhodococcus opacus B4: ROP_20160
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Entry
ROP_20160 CDS
T00882
Symbol
gcdH
Name
(GenBank) putative glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00071
Fatty acid degradation
rop00310
Lysine degradation
rop00362
Benzoate degradation
rop00380
Tryptophan metabolism
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
ROP_20160 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
ROP_20160 (gcdH)
00380 Tryptophan metabolism
ROP_20160 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ROP_20160 (gcdH)
Enzymes [BR:
rop01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
ROP_20160 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Motif
Other DBs
NCBI-ProteinID:
BAH50263
UniProt:
C1B0R3
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Position
complement(2147142..2148314)
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AA seq
390 aa
AA seq
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MSDSQTLSQLFALDSLLDTEEIAIRDTVRRFADEKIRPHIGEWFEAAALPVRELAEGLGE
LGVLGMHLEGYGCAGMSATAYGLACLELEAVDSGIRSLVSVQGSLAMYAIHHYGSEDQKQ
EWLPRMAAGKAIGCFGLTEPDFGSNPAGMRTNAKRDGDDWILNGTKMWITNGSVADVAVV
WARTDDGIRGFVVPTDTPGFSAPEIKHKMSLRASVTSELVLEDVRLPESAMLPEAKGLSG
PLGCLNEARFGIIFGAMGAARDCLESAISYAQDRQVFDKSLAAYQITQVKIADMALEVGK
GHLLAYHLGRLKDRGEARSEQVSTGKLNNVREAIAIARECRTILGANGITLEYPVIRHAN
NLESVLTYEGTSEVHQLVIGKALTGEAAFR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactcgcagaccctgtcccagctgttcgccctcgactcgttgctcgacaccgag
gagatcgcgatccgcgacaccgtgcgccgcttcgcggacgagaagatccggccccacatc
ggcgaatggttcgaggcggcggcgctgcccgtgcgcgagctggcggaaggtctgggcgaa
ctcggcgtgctcggcatgcacctcgagggatacggctgcgccggcatgagcgccaccgcg
tacggcctggcctgcctggaactcgaggccgtcgactccggaatccgcagcctcgtgtcc
gtgcagggttccctcgccatgtacgcgatccaccactacggcagcgaggaccagaagcag
gaatggctgccccgcatggccgcgggcaaggcgatcggctgcttcggtctcaccgagccc
gacttcggctccaaccccgccggcatgcgcaccaacgccaagcgggacggtgacgactgg
atcctcaacggcaccaagatgtggatcaccaacggttccgtcgccgacgtcgcggtcgtg
tgggcacgcaccgacgacggcatccgcggattcgtcgtccccaccgacacccccggtttc
tcggcacccgagatcaagcacaagatgtcgctgcgggcgtccgtcacctccgaactcgtg
ctcgaggacgtccgactgcccgaatccgcgatgctgccggaggccaaggggctgtccgga
ccgctgggctgcctcaacgaggcccggttcggcatcatcttcggcgcgatgggcgccgcc
cgcgactgcctcgagtccgccatctcctacgcgcaggaccgtcaggtgttcgacaagtcg
ctcgccgcgtaccagatcacccaggtcaagatcgccgacatggcgctcgaggtcggcaag
ggtcacctgctcgcgtaccacctcggacggctcaaggaccgcggcgaggcacgctccgag
caggtcagcacgggcaagctgaacaacgtccgggaggccatcgcgatcgcccgcgaatgc
cgcaccattctcggcgccaacggaatcacgctggaataccccgtgatccggcacgccaac
aacctcgagtcggtgctcacctacgagggcacgtccgaggtgcaccagctggtgatcggc
aaggcactgacgggcgaggcagcgttccggtga
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