Rhodococcus opacus B4: ROP_20450
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Entry
ROP_20450 CDS
T00882
Symbol
alkA
Name
(GenBank) 3-methyladenine-DNA glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROP_20450 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_20450 (alkA)
Enzymes [BR:
rop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
ROP_20450 (alkA)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROP_20450 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
DUF7511
HHH
Motif
Other DBs
NCBI-ProteinID:
BAH50292
UniProt:
C1B0U2
LinkDB
All DBs
Position
complement(2182455..2183306)
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AA seq
283 aa
AA seq
DB search
MRVLLPYRGPFTHAPLWGALRAHTLSGLERHDPDGTHTRVVNGPHGPALVSVVVRPADGD
VEADVTPADPDDVEALTATIRRWLDLDADPLPIDAALSRHPQLAALVAQRPGLRRLGSVD
GFETAVLTVLGQQVSLAAARTFGSRLVAAYGRPVHDGFFAFPEPQTLAALAPEQLRSTLG
LTGSRARTVLALAEAASNGLRLGADTDPAEFRAGLLALPGIGPWTADYLTVRVLGDPDAF
TPDDLVLKRALGVRTGRQAAELAEAWRPWRAYALFHLWTDAAY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgagagtgctgttgccctaccggggtccgttcacccatgcaccgctgtggggtgcgctc
cgcgcgcacaccctgtccgggctcgagcggcacgaccccgacggaacccacacccgggtg
gtgaacggaccgcacgggcccgcgctggtgtccgtggtcgtgcgccccgccgacggggat
gtcgaggcggatgtgacaccggcggatccggacgatgtcgaggcgttgaccgccacgatc
cggcggtggctcgacctggatgcggatccgctgccgatcgacgccgcgttgagccgccac
ccgcagcttgctgcgctggtggcgcaacggccgggactgcggcgcctgggtagcgtggac
gggttcgagacagcggtcctgaccgttctcggacaacaggtttcgctggccgctgcccgg
acgttcgggagccggctcgtggccgcgtacggccggcccgtccacgacggcttcttcgcg
ttccccgaaccgcagacgctggcggcgctcgcacccgaacagttgcgctcgactctcggt
ctcaccgggtcccgggccaggacggtgctcgcgctcgccgaggcagcgtcgaacggactg
cgtctcggcgcggacaccgatccggccgaattccgggccggtctgctcgcgctgcccggt
atcggcccgtggacggcggactatctgacggtgcgggtactgggcgacccggacgcgttc
acccccgacgacctcgtcctcaaacgcgcgctgggggtcaggaccggaaggcaggcagcg
gaactcgccgaggcgtggcggccctggcgggcatacgccctgtttcacctgtggacggac
gcagcgtattag
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