Rhodococcus opacus B4: ROP_26130
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Entry
ROP_26130 CDS
T00882
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00071
Fatty acid degradation
rop00362
Benzoate degradation
rop00650
Butanoate metabolism
rop01100
Metabolic pathways
rop01120
Microbial metabolism in diverse environments
rop01200
Carbon metabolism
rop01212
Fatty acid metabolism
Module
rop_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ROP_26130 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ROP_26130 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ROP_26130 (fadB)
Enzymes [BR:
rop01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ROP_26130 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
MctB
Pyr_redox_2
NAD_binding_7
ApbA
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BAH50860
UniProt:
C1B412
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All DBs
Position
complement(2807281..2809344)
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AA seq
687 aa
AA seq
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MSTQYSVAGSVAIIRLDNPPVNGLGLSTRQGILRDLSRALNSPEVESIVLTGDGKFFSAG
ADITEFGTPRSSEEPSLRTVIAALEDSAKPVVAALEGTCFGGGLELALGAHYRVAAKTAT
VGLPEVTLGLVPGAGGTQRLPRVLTVRSAAEMITGGSPRRAGVLAADPGQRLFDRVVDSD
TITAAIQFAGEMAVSGKCPRIRDLEVIGDEDLGPLRAQLTKRSRGFEAPLVALDLVERAR
SVPFAEGLDAERAAFLELVGGDQSAALRHAFFAERTARKIPGLDPDTTVRPVREVAVVGA
GTMGGGIAMNFLNAGIPVIVLETSQEPLARGLATIRRNYQAQVDKGKLTPEAMEQRMGLL
RPTVDYADLADCDLAIEAVFEDMDVKRAVFTELDEVMKPGAILASNTSTLDVDTIAAFTR
RPADVVGMHFFSPANVMTLLEIVRADKTADDVLATVSAVGQRIGKVTVVSGVCDGFIGNR
MLARYRGAANALLEAGASPERIDSAIEDFGYAMGPYRVGDLAGGDIGWAIRKRRYAENPD
LPRDEISDRLCEMGRFGQKTGAGWYDYEPGRRDAIPSPVVAELLESYHREKRTRRQDFTP
EEIVQRLVFALVDEGARILDEGIALRASDIDVVYLAGYGFPRHRGGPMFYAGTVGLATVE
QALRTFDAGAEPAPLLTRLAKEGKTFS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcagtacagcgtcgccggtagcgtcgcgatcatccgcctcgacaatccgccg
gtcaacggtctcgggctgtcgacccgacaggggattctccgggacctctcccgcgccctg
aattcgcccgaggtcgagtcgatcgtgttgaccggcgacggcaagttcttctccgccggc
gccgacatcaccgaattcggcacacccaggtcctcggaggagccgtcgctacggaccgtg
atcgcagcgctcgaggactcggccaagccggttgtcgcggctctggaggggacgtgtttc
ggcggcggcctcgaactcgcactcggcgcgcactaccgggttgcggcgaagaccgcgacg
gtcggcctgccggaggtgacgctggggttggtgcccggcgccggcggcacgcagcgactg
ccccgggtgttgaccgtgcggtccgcggccgagatgatcaccggtggttcgccgcgtcgg
gcgggtgtgctggccgccgatccggggcagcgattgttcgatcgagtggtcgattccgat
accatcaccgctgcaatacaattcgccggagagatggccgtgtcgggtaagtgtccacgg
atccgggacctggaggtgatcggggacgaggacctcggaccgttgcgtgcgcaactgacc
aagcgcagccgcgggttcgaagccccactggtggccctcgacctcgtcgagcgggcgcgc
tccgtcccgttcgccgagggcctcgacgccgagcgcgccgcgttcctcgaattggtgggc
ggcgatcagtcggcggcgctgcggcatgcgttcttcgcggaacggacggcccggaagatt
ccgggcctggaccccgacacgacggtgcggccggtgcgagaggtggcggtggtcggcgcc
ggcaccatgggcggcggcatcgccatgaacttcctcaacgcgggcatcccggtcatcgtg
ctcgagacctcgcaggaacctctcgcccgcggtctcgccacgattcgccgcaactatcag
gcgcaggtggacaaggggaaactgactcccgaggccatggagcagcgcatggggttgctc
cgccccaccgtcgactacgccgatctcgcggactgcgaccttgcgatcgaggccgtgttc
gaggacatggacgtcaagcgtgcggtattcaccgagctggacgaggtgatgaagcccggt
gcgatcctcgcgtccaacacctcgacgctcgatgtcgacaccatcgccgcgttcacccgc
cggcctgccgacgtggtcgggatgcacttcttcagtcctgcgaatgtgatgacgctgctc
gagatcgtgcgcgcggacaagacggccgacgatgttctcgcgaccgtgtcggccgtcgga
cagcggatcgggaaggtcacggtcgtgtccggagtgtgcgacgggttcatcggcaatcgg
atgctggcccggtatcgaggggcagccaacgctcttctcgaggcaggggcgtcgccggag
aggatcgactccgccatagaggatttcggatatgcgatgggaccgtaccgggtcggcgat
ctggcgggcggcgacatcgggtgggcgatccgcaagcgccgttacgcagagaacccggac
ctgccgcgagacgagatctcggaccggctgtgcgagatgggccgattcgggcagaagacg
ggtgcaggctggtacgactacgagcccggtcgtcgtgacgccatcccgagccccgtcgtg
gcggaactgctcgagtcctaccaccgggagaagcgcacccggcggcaggactttactccc
gaggagatcgtgcagagactggtcttcgctctcgtggacgagggtgcgcggattctggac
gaaggaatcgcgttgcgcgcgtccgatatcgacgtggtctatctggcgggatacggcttt
ccccggcatcgtggcgggccgatgttctacgccggcaccgtcgggctggccacggtcgag
caagccctgcggacgttcgacgcaggcgccgaaccggcacctctgctgacgcgattggcg
aaggaaggcaagaccttcagctga
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