Rhodococcus opacus B4: ROP_33960
Help
Entry
ROP_33960 CDS
T00882
Name
(GenBank) LysR family transcriptional regulator
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rop03000
]
ROP_33960
03036 Chromosome and associated proteins [BR:
rop03036
]
ROP_33960
Transcription factors [BR:
rop03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ROP_33960
Chromosome and associated proteins [BR:
rop03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ROP_33960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
HTH_24
P22_Cro
MarR_2
Motif
Other DBs
NCBI-ProteinID:
BAH51643
UniProt:
C1B7J0
LinkDB
All DBs
Position
complement(3682513..3683388)
Genome browser
AA seq
291 aa
AA seq
DB search
MDLDLAALRTFAAVIDEGTFDAAARVLHITPSAVSQRIKALEQQVGRVLVQRAKPVRATE
SGHVVLTLARQMAHLEREAMSSLNPEEATTSTLSLVVNADSLSTWMIPALARLAPEHRAL
FDLHREDEFHSTTLLREGTVMAAVTSVPEAVQGCTVEKLGSMRYRALCSRDYADRWLPDG
PTADALAVAPMLDFDRKDELQARFLRGFTRRRLQPPRHFVPGSSAFSDAVRHGLGWGLLP
ELHTGDDHGLVELDPSRPVDVPLYWQRWKLDSPILAALTTAVRDGAREALR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatttggacctggcagctctccgcacgttcgccgccgtgatcgacgagggcaccttc
gacgccgcggcccgggtactgcacatcacgccgtcggcggtgagccagcggatcaaggcg
ctggagcagcaggtgggacgcgtcctggtgcagcgggccaagccggtccgggccaccgag
tccggacacgtcgtgctcacgctcgcccgccagatggcccacctcgagcgcgaggccatg
tcctccctcaatcccgaggaggcgacgacgagcacgctgtccctcgtcgtcaacgcggat
tcgttgtccacgtggatgattccggcgctcgcccggctggcaccggaacatcgggcgctg
ttcgacctgcatcgggaagacgaattccactcgaccaccctgctgcgggagggcacggtg
atggccgcggtgacgtcagtccccgaggcagtccagggctgtacggtggagaagctggga
tcgatgcggtaccgcgcgctgtgcagccgcgactacgccgaccgctggctccccgacggc
ccgacggcggacgccctcgcggtggcgccgatgctcgacttcgaccgcaaggacgaactg
caggcccggttcctgcgcggcttcacccggcgccggttgcaacccccgaggcatttcgtc
cccggctcgtccgcgttctccgacgccgtccgccacggactgggctggggtctgctgccg
gaattgcacaccggcgacgaccacggtctcgtcgaactcgacccgtcccgacccgtcgac
gtcccgctgtactggcagcggtggaagctggattcgccgatcctcgcggcgctcaccacc
gcggtccgggacggcgcgcgcgaagcgttgcggtga
DBGET
integrated database retrieval system
