Rhodococcus opacus B4: ROP_38680
Help
Entry
ROP_38680 CDS
T00882
Name
(GenBank) putative uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROP_38680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_38680
Enzymes [BR:
rop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ROP_38680
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROP_38680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAH52115
UniProt:
C1B8W2
LinkDB
All DBs
Position
4176733..4177404
Genome browser
AA seq
223 aa
AA seq
DB search
MSRATKPSAAPFVPDTVDLDKLSHAAEGCRGCDLYRDAGQTVFGAGSRSARMMLVGEQPG
DQEDRAGEPFVGPAGKLLNKALDAADIDRDLTYVTNAVKHFKFIPAERGKRRIHKKPNRT
EIVACRPWLIAELAAVQPDVLVCLGATAAQALLGPSFRLTEHHGELLHLDGEVDVDVDPD
VFATIHPSAVLRGPSAVLRGPSEDRDDAFDALVADLKKAAAAL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtgccaccaaaccctcggccgcaccgttcgttccggacaccgtggacctcgac
aagctgtcccacgcggcggaggggtgccgcggctgtgacctgtaccgcgacgccgggcag
accgtcttcggcgcgggcagccgatccgcgcggatgatgctcgtcggcgagcaacccggc
gatcaggaggaccgcgccggcgaaccgttcgtcggaccggcgggcaagctcctgaacaag
gcgctcgacgcggcggacatcgaccgcgacctcacctacgtcaccaacgcggtcaagcac
ttcaaattcattcccgccgaacgcggcaagcgccgaatccacaagaagccgaatcgcacc
gagatcgtcgcgtgcaggccatggctgatcgccgaactggcggccgtgcagcccgacgtc
ctcgtgtgcctcggcgccaccgccgcgcaggcactgctcggaccgtcgttccgcctcacc
gaacaccacggggagctgctacacctcgacggcgaggtggacgtcgacgtggatccggac
gtcttcgcgacgatccacccgtccgccgtgctgcgaggaccgtccgccgtgctgcgagga
ccgtcggaggaccgggacgacgcattcgacgccctcgtcgccgacctgaagaaggccgcc
gccgcgctctga
DBGET
integrated database retrieval system
