Rhodococcus opacus B4: ROP_39430
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Entry
ROP_39430 CDS
T00882
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
rop
Rhodococcus opacus B4
Pathway
rop00074
Mycolic acid biosynthesis
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
Module
rop_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
ROP_39430 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rop01004
]
ROP_39430 (pks13)
Lipid biosynthesis proteins [BR:
rop01004
]
Polyketide synthase
Modular PKS
ROP_39430 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Motif
Other DBs
NCBI-ProteinID:
BAH52190
UniProt:
C1B937
LinkDB
All DBs
Position
4253758..4258746
Genome browser
AA seq
1662 aa
AA seq
DB search
MTVAQLRDWLRNWIADATGQPVGQITDDRPMEEFGLSSRDAVALSGEIEELVGVTLTATV
AYQHPTIASLATRIIEGEPEQPDDSADAAYYASAPTSDAHDIAIVGLASRFPGAGTTPAE
MWRMLAEGRDGISDLPEGRWEEFTSDPQIKAAVEKANTQGGYLDDVKTFDAEFFAMSPLE
VANVDPQQRLAMELTWEALEHARIPASDLKGEQVGVFIGSSANDYQLLAVSDPVHAHPYA
LTGTSTSIVANRVSYFYDFRGPSIALDTACSSSLVAVHQAVRSLRSGESDLALAGGVNML
VAPPATLGFDQLGVMAPNGRIKAFSSDADGMIRAEGGGLVVLKRLEDAERDGDEIFAVIA
GSAVNQDGRSNGLAAPNPDAQADVLRHAYRDAGINPAGVDYIEAHGTGTILGDPIEADAL
GRVVGRGRADDKPALLGSAKTNFGHLEAAAGAAGLIKVVLSMREDTLPPTLNFAGPNPYI
AFDKAHLQVIPEGAAWPRYTGAAVAGVSGFGFGGTNAHVVVREYTGPAVDDETEVTEPAV
PAEDAVVAEAVEPTVVLAVSGALPSRRRRAAADLADWLETEEGSTTPLADVARALARRNH
GRSRGVVLAKTRSEAVTGLRAVAAGKPGQGVFTADSPSSKGAVWVLSGFGSQHRKMAKQL
YLENPVFAAAIDEVDALIEDEAGYSMKEKFLDDAIDYDVETSQVGIFAIQIGLAALLRHH
GAEPEAVVGHSMGEAAAAYISGGLPLEDAVRVICARSRLMGEAEATLEGDDIRLMALVEY
SASEIETVLTDFPHLEVCVYAAPTHTVIGGPEPEVNAIVARAEGEEKMARVLKTKGASHT
SQVDPLLGELAAELAGIEPTKLKLGVYSSVDQDTYYRAGHEPIHREEYWTKGLRHSVYFT
NAVRLAVGSGHTTFVELAPNPVALMSVAATAFDAGLHDMQLIQTLKRKEDEPLGVLAALA
QLYVHGHAVDLSSLLPDGDFAAVPRTAWIRKPYWVETRIDSSGNTRVPGAHVSLPDGRHV
WEVQAGAVTDLPALVTAAASQVLSDVTLAASVLHAHAPAEGTLTTTLNPHPGGASLQVHA
KSGPSFTLLFDAAVTSGDALPEPVVAPVQETSPVEELPEVVEDIGEKWDPNGSQTLEDRL
ALIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLQAVKDANLMEV
GKYLRYAVENREEVQALADQQKAEKEAAEAAEADRDAEAAEADRDAEAAEADRDAEAAEA
DRGAEAESVLDAEDTSVEAEAEAIIAATPVAETPETPVADGDVPPRDAAERLTFATWAVV
TGESAKGIFNTLPILNDETAEKLAARLSERANGEITFDDVLDSTTIEELANVVRGFLEDS
GKIDGLVRALRPRPEGSDAVPVFVFHPAGGSTVAYEPLLKRLPEGTPMYGFERTEGPIDV
RAAEYLPLIREIQGDGPYVLYGWSLGGVLAYAVAKLLRESGADVRIVGLIDTVMAGEKVE
DTPDEIRKRWQRYAAFAKKTYNVDYPLPYDKLAAAESDEEQIKILTELLKLSGTKIPGGI
IEHQRTSWLDNRAIQTAELEQYDGDVVLYMADRYHDDVMNLEPAFKTRKPDGGWGDAVKN
LEIIHVGGDHIQIVDEPYIAKVGADLTKKLAAIQAAGTGAHQ
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcgcagttgcgtgactggctgcgcaactggattgccgacgcaaccgggcaa
ccggtcggtcagatcaccgacgaccgcccgatggaagagttcggtctgtcgtcccgcgac
gccgtcgcactcagcggtgagatcgaggaactggtcggcgtcacgctcacggcgacggtc
gcgtaccagcaccccaccatcgcgtcgctggcgactcgcatcatcgagggcgaacccgag
cagcccgacgactcggccgacgccgcctactatgcgtcggcgccgacgtcggatgcgcac
gacatcgcgatcgtgggcctggcctcacgcttcccgggtgcaggcaccactcccgccgag
atgtggcggatgctggcggagggccgcgacggcatctccgacctgcccgagggccgctgg
gaggagttcacctccgacccgcagatcaaggccgccgtcgagaaggccaacacgcagggc
ggctacctcgacgacgtgaagacgttcgacgcggagttcttcgcgatgtccccgctggag
gtcgcgaacgtcgacccgcagcagcgtctcgcgatggaactgacgtgggaggcactcgag
cacgcccgcatcccggccagcgacctcaagggtgagcaggtcggtgtgttcatcggcagc
tcggccaacgactaccagttgctcgcggtcagcgacccggtccacgcgcatccgtacgcg
ctgaccggcacgtcgacgtccatcgtcgcgaaccgggtctcgtatttctacgatttccgc
ggaccgtccatcgccctcgacacggcgtgctcgtcttcgctcgtcgcggtgcaccaggcg
gtgcgctcgctgcggtccggtgaatcggatctcgcgctcgccggcggcgtcaacatgctc
gttgcaccgcccgccacgctgggcttcgaccagctgggtgtgatggcccccaacggccgc
atcaaggcgttctcctccgacgccgacggcatgatccgtgccgagggcggcggtctcgtc
gttctcaagcgtctcgaggacgccgagcgcgacggcgacgagatcttcgccgtcatcgcc
ggtagcgcggtcaaccaggacggccgctccaacggtctcgcggccccgaaccccgacgcg
caggccgacgtcctgcggcacgcctaccgggacgcgggcatcaacccggccggcgtcgac
tacatcgaggcgcacggcaccggcaccatcctcggcgatcccatcgaggcggacgcgctc
ggacgcgtcgtcggtcgtggacgcgccgacgacaagcccgcgctgctcggttcggccaag
accaacttcggtcacctcgaggccgccgcgggcgccgcgggtctgatcaaggtcgtgctg
tcgatgcgggaggacacgcttccccccacgctgaacttcgccggacccaacccgtacatc
gcgttcgacaaggcgcatctgcaggtcattcccgagggtgcggcgtggccgcgctacacg
ggcgcggcggtcgccggtgtgtccggattcggtttcggtggcaccaacgcgcacgtggtc
gtgcgcgagtacaccggacctgccgtcgacgacgagaccgaggtcaccgagcccgccgtt
cccgccgaggacgcggtcgtggccgaggctgtcgagccgacggtcgtcctcgcggtgtcc
ggtgcgctgccgtcgcgtcgtcgccgggcggcagccgatctggccgactggctggagacg
gaagagggcagcaccaccccgctcgccgacgtcgcccgcgctctcgcacgccgcaaccac
ggtcgctcgcggggcgtcgtcctggcgaagacccgctccgaggccgtcaccggtctgcgc
gccgtcgccgcgggcaagcccgggcagggcgtgttcaccgcggattcgccgtcgtcgaag
ggcgccgtctgggttctgtcgggcttcggttcgcagcaccgcaagatggccaagcagctg
tacctggagaacccggtgttcgccgcggccatcgacgaggtcgacgcgctgatcgaggac
gaggccggctactccatgaaggagaagttcctcgacgacgcgatcgactacgacgtcgag
acttcgcaggtcggcatcttcgccatccagatcggtctggcggcgctgttgcgtcaccac
ggcgccgagccggaagccgtcgtcggccactcgatgggcgaggctgccgccgcgtacatc
tcgggcggtctgccgctcgaggacgccgtccgcgtgatctgcgcccggtcccgcctcatg
ggcgaggccgaggccacgctcgagggcgacgacatccgtctgatggcgctcgtcgagtac
agcgcctccgagatcgagaccgtcctcaccgacttcccgcacctcgaggtctgcgtgtac
gcggccccgacgcacaccgtcatcggcggccccgagcccgaggtcaacgccatcgtcgcg
cgggccgagggcgaggagaagatggcccgcgtcctcaagacgaagggcgccagccacact
tcgcaggtcgacccgctgctgggtgagctggctgcggaactggcgggcatcgagccgacc
aagctgaagctgggcgtgtactcgtccgtcgaccaggacacctactaccgcgccggccac
gagccgatccaccgcgaggagtactggaccaagggtctgcgccacagcgtgtacttcacc
aacgccgtccgcctcgccgtcggcagcgggcacaccacgttcgtggagctggctcccaac
ccggtggccctgatgtccgtggccgccaccgcgttcgacgccggcctgcacgacatgcag
ctcatccagacgctcaagcgcaaggaggacgagccgctcggtgtcctcgccgcgctcgcg
cagctgtacgtgcacgggcacgccgtcgacctgtcgtcgctgctccccgacggcgacttc
gcggctgttccgcgcaccgcgtggatccgcaagccgtactgggtggagacccggatcgat
tccagcggcaacacccgcgttccgggcgcgcacgtgtcgcttcccgacggccgccacgtg
tgggaggtccaggccggcgcggtcaccgacctgcccgcactggtcaccgccgccgcgtcg
caggtgctgtcggacgtcacgctcgccgcgtccgtcctgcacgcccacgcgcccgcggag
ggcacgctcaccaccacgctcaacccgcatccgggtggcgcgtcgctgcaggtgcacgcg
aagagtggtccgagcttcacgctgctgttcgacgccgccgtcacgtccggggacgcgctg
cccgagcctgtcgtcgcgccggtacaggagacgtcgccggtggaggagctgcccgaggtc
gtcgaggacatcggcgagaagtgggacccgaacggctcgcagacgctcgaagaccggctc
gcgctgatcgtcgccgagtccatggggtatgcccccgaggacctgcccgccgagatcccg
ctcatcgagctgggcctcgattcgctgatggccgtccgcatcaagaaccgcgtcgagtac
gagttcgacatcccgcaactgcagctgcaggcggtcaaggacgccaacctgatggaggtc
ggcaagtacctgcgttacgcggtcgagaaccgcgaagaggtgcaggcgctcgccgatcag
cagaaggccgagaaggaggcggcggaggccgcggaggccgaccgtgatgcggaggccgcg
gaggccgaccgtgatgcggaggccgcggaggccgaccgtgatgcggaggctgcggaggcc
gaccgtggtgcggaggccgagtcggttctcgacgccgaggacacgtcggtggaggcggag
gccgaggcgatcatcgcggccaccccggtggctgagaccccggagacgcccgtggcggac
ggcgacgtgccgccgcgcgacgccgccgagcgcctgacgttcgcgacgtgggccgtcgtc
accggtgagtccgcgaagggcatcttcaacacgctgccgatcctgaacgacgagacggcg
gagaagctggcggcccggttgtcggaacgcgcgaacggtgagatcacgttcgacgacgtc
ctcgactccaccaccatcgaggaactggccaatgtggtgcgcggcttcctcgaggattcc
ggcaagatcgacgggctggtccgcgcactgcggcctcgcccggagggatccgacgccgtc
cccgtgttcgtgttccacccggccggtgggtcgacggtcgcgtacgagccgctgctgaag
cgtctgcccgagggcacgccgatgtacgggttcgagcgcaccgagggtccgatcgacgtc
cgggcggcggagtacctgccgctcatccgcgagatccagggcgacggaccgtacgtgctg
tacggctggtcgctgggcggcgtgctggcctacgcggtggcgaagctgctgcgcgagtcg
ggtgccgacgtccggatcgtcggcctgatcgacacggtcatggcaggggagaaggtcgag
gacacccccgacgagatccggaagcgctggcagcggtacgcggcgttcgcgaagaagacg
tacaacgtggactacccgctgccgtacgacaagctcgcggcggcggagagcgacgaagag
cagatcaagatcctgacggaactgctcaagctgagtggcaccaagattccgggcggaatc
atcgagcaccagcgcacgtcgtggctcgacaaccgggccatccagaccgccgaactcgag
cagtacgacggcgacgtcgtcctgtacatggccgaccgctatcacgacgacgtgatgaac
ctcgagcccgcgttcaagacccgcaagccggacggcggctggggtgacgcggtgaagaac
ctggagatcatccacgtgggcggcgatcacatccagatcgtcgacgagccgtacatcgcg
aaggtcggtgccgacctcaccaagaagctggcggcgatccaggccgccggaaccggagcg
catcagtga
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