Rhodococcus opacus B4: ROP_42430
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Entry
ROP_42430 CDS
T00882
Name
(GenBank) putative ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
rop
Rhodococcus opacus B4
Pathway
rop01501
beta-Lactam resistance
rop02010
ABC transporters
rop02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROP_42430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROP_42430
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ROP_42430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rop02000
]
ROP_42430
Transporters [BR:
rop02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
ROP_42430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
AcrIIA4
Motif
Other DBs
NCBI-ProteinID:
BAH52490
UniProt:
C1B9Y7
LinkDB
All DBs
Position
4569624..4571240
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AA seq
538 aa
AA seq
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MRITRVATAVLAVGLAAGLLSACSSGDSTSGGGSGIVNAWAGEPQNPLIPTNTSENQGGR
VVDSLFAGLVSYDSDGGVQNEVAESIETTDGKNFTVKLKDGWTFTDGTPVTAASFVDAWN
YGALSTNAQLQASFFDPIQGYDEVAAENPTAQTMSGLKVVDDSTFTIELKQPESAFPDRL
GFAAYYPLPAVAYQDMAAFGENPVGNGPYMMSGPGAWQHNVRIDTVVNPDYNGNRKPKNA
GVDFVMYNSLDTAYTDLLAGNVDVLDQVPPSAVTTFETDLPGRTVNQPSATIETFTIPGR
LPHFSGEEGTLRRQAISMAINRDQITQQIYNNTRTPALDFTSPAIEGWSDSLVGNGNLKY
DPEAAKRLWAQADAIAPWSGSFEIAYNGDGGHKEWVDATANNIRNTLGIDAKGKEYPTFA
QIRTEATNRTIPSAFRSGWQGDYPQQYGFLAQNYQTGGSSNDGDYSNPEFDRLLRASAGE
VDPGKAQDLLNQAQEVLLRDLPAVPTWYRNAASGWSENVSNVVIDWKGIPMYSDIEKN
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcatcacacgtgtggcaaccgccgttctggcggtcggcctggcagcggggctgctg
tccgcctgctcgtccggcgactcgacgagcggcggtggcagcggaatcgtcaacgcctgg
gcgggtgaaccgcagaatccgttgattcccaccaataccagcgagaatcagggtggccgc
gtcgtcgattcgctgttcgcgggtctcgtctcctacgactccgacggtggcgtccagaac
gaggtcgccgagtcgatcgagacgaccgacggcaagaacttcaccgtgaaactgaaggac
ggctggacgttcacggacggcacgcccgtcaccgcggcctcgttcgtcgacgcctggaac
tacggcgccctgtcgacgaacgcgcagctccaggcatccttcttcgacccgatccagggc
tacgacgaggtggccgccgagaaccccacggcgcagaccatgtcgggactgaaggtggtc
gacgattcgacgttcacgatcgaactgaagcaacccgaatcggccttcccggaccggctc
ggcttcgccgcgtactacccgctgcccgcggtggcgtaccaggacatggccgcgttcggt
gagaatcccgtcggcaacggtccctacatgatgtcgggacccggggcgtggcagcacaac
gtgcgaatcgacaccgtcgtcaaccccgactacaacggcaaccgtaagccgaagaacgcc
ggcgtcgacttcgtcatgtacaacagcctcgacacggcgtacacggatctgctcgcgggc
aacgtcgacgtcctcgatcaggtgccgccgagtgcggtcaccacgttcgagaccgacctg
ccgggccgcaccgtgaaccagccgtccgcgaccatcgagacgttcacgatcccgggccgg
ttgccgcacttcagcggcgaggagggcacgctacgccggcaggccatctcgatggcgatc
aaccgcgaccagatcacccagcagatctacaacaacacccgcacccctgcgctcgacttc
accagtcccgccatcgagggctggtcggattcgctcgtgggcaacgggaacctgaagtac
gacccggaggcggcgaagaggctgtgggcccaggccgacgccatcgccccgtggtcgggc
agtttcgagatcgcctacaacggcgacggcggccacaaggagtgggtcgacgccaccgcc
aacaacatccgcaacaccctcggcatcgacgccaagggtaaggagtatccgacgttcgcg
cagatccgcacggaggccaccaaccggaccatccccagcgcattccgttcggggtggcag
ggcgactacccgcagcagtacggcttcctcgcgcagaactaccagaccggcggcagttcc
aacgacggcgactactcgaaccccgagttcgaccggctgctgcgcgcctcggcgggtgaa
gtcgatcccggcaaggcccaggacctgctgaaccaggcgcaggaggttctcctgcgcgac
ctgcccgcggtcccgacgtggtaccgcaacgccgcgagcggctggtccgagaacgtgtcg
aacgtggtcatcgactggaagggcatcccgatgtattcggacatcgagaagaactga
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