Rhodococcus opacus B4: ROP_44580
Help
Entry
ROP_44580 CDS
T00882
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00250
Alanine, aspartate and glutamate metabolism
rop00310
Lysine degradation
rop00350
Tyrosine metabolism
rop00650
Butanoate metabolism
rop00760
Nicotinate and nicotinamide metabolism
rop01100
Metabolic pathways
rop01120
Microbial metabolism in diverse environments
Module
rop_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ROP_44580 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ROP_44580 (gabD)
00310 Lysine degradation
ROP_44580 (gabD)
00350 Tyrosine metabolism
ROP_44580 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ROP_44580 (gabD)
Enzymes [BR:
rop01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ROP_44580 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ROP_44580 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ROP_44580 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
DUF2188
DUF1487
DUF3102
DUF5876
Motif
Other DBs
NCBI-ProteinID:
BAH52705
UniProt:
C1BAK2
LinkDB
All DBs
Position
complement(4805291..4806739)
Genome browser
AA seq
482 aa
AA seq
DB search
MLEEAAIASVQTGLFIGGKWRDSARTMPVHDPSTGQILCTVADADASEAREALDAAVAAQ
PSWADTTPRERSTILMNAHRLLLENVDRLALVMTLEMGKPLTEARGEIAYAAEFFRWFAE
EAVRIDGGYMTAPGGGSRFLVTKQPVGPSLLITPWNFPMAMGTRKIGPAIAAGCTSVIKP
AAQTPLSILALADILTEAGLPDGVVNVVTTSSPDEVITPLILDGRARKLSFTGSTKVGKH
LLELCARTVMRTSMELGGNAPFLVFEDANLDDAVDGAMAAKMRNIGQACTAANRILVHSS
VAEEFTRKLTQRMEALPVGRGTEDGVVVGPLIDEAAVAKVGSLVADAVERGASVLTGGAA
LDRPGNFYPATVLTGVPDDAEMCHNEIFGPVAAISTFETEAEAVERANDTPYGLVAYVYT
ESLKRGIRVCEALESGMVGLNQGVVSNPAAPFGGVKESGLGREGGTTGIDEFLETKYIGV
AV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggaagcagcaatcgcatccgtacagaccggcctcttcatcggcggcaaatgg
cgcgacagcgcccgcaccatgccggtccacgacccgtccaccggacagatcctgtgcacg
gtcgccgacgccgacgcgtcggaggcacgggaggcgctggacgcagcggtcgcggcgcaa
ccgtcgtgggcggacaccaccccccgcgagcgcagcaccatcctcatgaacgcgcaccgg
ttgctgctcgagaacgtcgaccggctcgcgctcgtcatgacactggagatgggcaagcca
ctcaccgaggcccgcggcgaaatcgcctacgccgcagagttcttccgctggtttgccgaa
gaagccgtccgtatcgacggcggctacatgacggcgccgggcggcgggtcgcgattcctc
gtcaccaaacagcccgtcgggccgagcctgctcatcaccccgtggaacttcccgatggcg
atgggcacccgcaagatcgggcccgcgatcgccgccggctgcacgtccgtcatcaaaccg
gcggcgcagactccgctgtcgatcctggcgctcgccgacatcctcaccgaggccggactt
ccggacggcgtcgtcaacgtcgtcaccacgtccagcccggacgaggtgatcactcccctg
atcctcgacggccgggcccgcaagctgtcgttcaccggttcgacgaaggtcgggaagcat
ctgctcgaactgtgcgcccgcacggtcatgcgcacgtccatggaactcggcggcaacgcg
ccgttcctcgtgttcgaggacgcgaacctcgacgacgccgtcgacggcgccatggccgcg
aagatgcgcaacatcggccaggcctgcacggccgccaaccgcatcctcgtgcacagttcg
gtggccgaggaattcacccgcaagctcacccagcggatggaggcgctgccggtcggtcgc
ggcaccgaggacggcgtcgtcgtcggaccgctcatcgacgaggccgccgtcgccaaggtg
ggcagcctcgtcgccgatgccgtcgaacgcggggcgtcggtgctcaccggcggcgcggca
ctcgaccggccgggcaacttctacccggcgacggtgctcacgggcgtgcccgacgacgcc
gagatgtgccacaacgagatcttcggtccggtggccgcgatcagcacgttcgagaccgag
gccgaggccgtcgaacgggccaacgacaccccgtacgggctggtggcgtacgtgtacacc
gagagcctcaagcgcggcatccgcgtgtgcgaggcgctggaatcggggatggtcggactc
aaccagggcgtggtgtcgaacccggcggcgccgttcggcggcgtgaaggaatccggactc
gggcgcgaaggcgggaccaccggcatcgacgaattcctcgagaccaagtacatcggcgtc
gccgtctag
DBGET
integrated database retrieval system
