Rhodococcus opacus B4: ROP_49320
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Entry
ROP_49320 CDS
T00882
Symbol
cydD
Name
(GenBank) putative ABC transporter permease/ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
rop
Rhodococcus opacus B4
Pathway
rop02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROP_49320 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rop02000
]
ROP_49320 (cydD)
Transporters [BR:
rop02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
ROP_49320 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_16
AAA_29
AAA_22
AAA_30
T2SSE
AAA_23
AAA_25
cobW
AAA_33
AAA
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BAH53179
UniProt:
C1ATB5
LinkDB
All DBs
Position
5328287..5329975
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AA seq
562 aa
AA seq
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MSTAVGDAPRPAREGASRRPVDPRLWRYSAAARGYLVLTVGLSMVDVAMVIVSALMIGRV
LGGVIVDDATDLGRWSTELVVLAVAVGIRVLGTWLQSRFAHRSATRVVAELKGEVLGVAT
RMRPRELDPRRDEIATVLTRGIDGLVPYLTGYLPALVLAGTLTPATLVVIAFQDLTSAAI
IFVTLPLIPVFMILIGLLTKGKAAKTLTAMTTLSSQLLDLLAGLPTLRALGREQGPVTRV
RELGDAHRRTTMSALRVAFLSSMVLELLATLCVALVAVSIGLRLVYGGMELEAGIVALIL
APEVYLPLRRVGTQFHAAEDGMAAASRAFAVIDTDLSVDSDGAVVVDANGARLEFDGLDV
RSRRGPAPHRLTGVVEPGVVTVLTGPNGSGKTTAVHALLGLVEPARGDVRVAGAPVGSLD
RSAWWAQVAWLPQHPVLVPGTLDENLRLTGDVVDLEQACAATGFDEVLAELPDGWNTRVG
SGGTGLSLGQRQRLALTRVLATRRPVLVLDEPTAHLDDASERTVLDSLRHLAAAGRTVVV
VGHRPAVLAAADRVIGVSADVA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcggtaggcgacgcaccccgcccggcacgggagggtgcgtcccggcgtccc
gtcgacccccggttgtggcggtactcggcggccgcccgcggatatctcgtcctcacggtc
gggctgtcgatggtcgatgtcgcgatggtcatcgtgtcggcgctcatgatcggccgcgtg
ctcggcggggtgatcgtcgacgacgccaccgacctcggccggtggtccaccgaactggtg
gtgctcgccgtcgcggtggggatccgggttctcggcacctggctgcagtcccgcttcgcg
caccggtccgcgacccgggtcgtggcggaactgaagggggaggtgctcggtgtcgccacg
cggatgcggccgcgtgaactcgatccgcgccgggacgagatcgcgaccgtgctcacccgc
ggcatcgacgggctcgtgccgtacctcaccgggtatcttccagccctggtgctcgcgggc
acgctcactccggcgacgttggtggtcatcgcgtttcaggatctgacgtccgcggccatc
atcttcgtcacgctgccgctgatcccggtcttcatgatcctcatcggcctgctcaccaag
ggcaaggccgccaagaccctgaccgcgatgaccacgttgtcctcacaactcctcgacctg
ctggcaggtctgcccacgctgcgggcgctcggccgcgagcagggcccggtgacgcgggta
cgtgaactcggcgacgcccaccgccgcaccacgatgtcggcgctgcgggtggcgttcctg
tcgtcgatggtgctcgaactgctggccacgctgtgcgtcgcgctcgtcgccgtgagcatc
ggactccggctggtgtacggggggatggaactcgaagcgggaatcgtggcactgatcctc
gcgcccgaggtgtacctcccgctgcggagggtcggaacccagttccacgccgccgaggac
ggaatggccgccgcgagcagggccttcgccgtgatcgataccgacctttcagtcgactcc
gacggcgcggtcgtggtggacgcgaacggggcgcgtctcgaattcgacggcctggacgtc
cggtcccggcgcggaccggcgccgcaccgactgacgggggtcgtcgaacccggcgtggtg
accgtgctgaccggaccgaacggatccgggaaaacgactgcggtacacgcacttctcggt
ctcgtagaaccggcgcggggcgacgtgcgcgtggccggcgcacccgtgggctcgctcgac
cggtccgcgtggtgggcgcaggtggcgtggctgccccagcatcccgttctcgttcccggc
accctggacgagaacctgcggctgaccggagacgtcgtcgacctcgaacaggcgtgcgcc
gccacgggtttcgacgaggtgctcgccgaacttcccgacgggtggaacacgcgggtcgga
tccggcggaacgggactgtcgctcggtcagcggcagcgtctcgcgctgacccgggtgctc
gccacccggcgtccggtgctggtgctcgacgaaccgaccgcacacctcgacgacgcgtcg
gagcgcaccgtgctggattccctgcggcacctcgccgccgcaggccggacggtcgtggtc
gtcgggcaccggccggccgtgctcgcggccgccgaccgggtgatcggggtgagcgccgat
gtcgcgtga
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