Rhodococcus opacus B4: ROP_50630
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Entry
ROP_50630 CDS
T00882
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_50630 (phr)
Enzymes [BR:
rop01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
ROP_50630 (phr)
DNA repair and recombination proteins [BR:
rop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
ROP_50630 (phr)
Prokaryotic type
ROP_50630 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
BAH53310
UniProt:
C1ATP6
LinkDB
All DBs
Position
5470096..5471436
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AA seq
446 aa
AA seq
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MDTALVWFRRDLRLGDLPTLHTVAESGARALGLFVLDDRLLKTSGGARRDFLFRSLAALD
DSLDGRLLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAEHVDLVATGSPY
AVAPGRVTKTDGEPYRVFTPYFRQWLEHGWRAPIDTGPDTVEWMDPDDVKTRRVTIPEPE
SDGYAAGEAAALERWAEFCEDDLAGYEDARDRPGLDATSRMSVYLKYGNIHPRTMLRDLA
RRRSKSAEQYRRQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGPDAEDAYTAWCEG
RTGFPIVDAGMRQLKAENWMHNRVRMIVASFFVKDLHLPWWRGARYFMNQLVDGDLANNQ
HGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGISGKAVHALKDGRPE
DYPPPIVDHAHERQEALARYGEIKAP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcactcgtctggttccgccgcgacctccggctcggtgatctgccgacgctt
cacacggtcgccgagtcgggggcacgcgcgctcggcctgttcgtcctcgacgaccggttg
ctgaagacgtcggggggtgcccgccgggacttcctgttccgcagcctcgccgcactggac
gacagtctcgacggccggttgctggtggtgaagggcgatcccgtcgacgtggttccgcgg
gtggcgaagaaggtctcggccgaagaggtgcacgtcagcgccgactacggaccctacggt
cgcgagcgggacgccgccgtcgccgagcacgtcgacctggtggccaccggttcgccgtac
gccgtggcgcccggccgggtgaccaagacggacggggagccgtaccgcgtgttcaccccg
tacttccggcagtggctcgagcacgggtggcgtgcgccgatcgacaccgggcccgacacg
gtggagtggatggacccggacgacgtgaagacgcggcgggtgacgatcccggaacccgaa
tccgacgggtacgccgcgggtgaggcggcggcgctggagcggtgggcggagttctgcgag
gacgacctggccgggtacgaggacgcgcgggatcgtcccgggctcgacgcgaccagccgg
atgtcggtgtacctgaaatacggcaacattcatccgcggacgatgctccgcgatctcgcc
cgccgccgcagcaagagtgccgagcagtaccggcggcagctggcgtggcgggacttctac
gccgacatcctcttccagcgtcccgacagtgcacgcggcaattacgaccgccgcttcgac
cacatccgctacgacagcgggcccgacgccgaggacgcgtacacggcgtggtgcgagggc
cggacggggttcccgatcgtcgacgccgggatgcggcagctgaaagccgagaactggatg
cacaaccgggtgcggatgatcgtcgcgtcgttcttcgtcaaggatctgcacctgccgtgg
tggcggggcgcccgctacttcatgaaccagctcgtcgacggcgatctggcgaacaaccag
cacgggtggcagtggaccgcgggatcgggaacggacgcgtcgccgtacttccgggtgttc
aaccccacgacgcagggcgagaagttcgaccccgacggcgagtacgtgcgccggtgggtg
cccgaattgcgcgggatctccgggaaggccgtccatgctctgaaagacggccgccccgaa
gactatccgccgccgatcgtcgaccacgcccacgaacggcaggaggccctggcccggtac
ggtgagatcaaggccccgtga
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