Rhodococcus opacus B4: ROP_59210
Help
Entry
ROP_59210 CDS
T00882
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00260
Glycine, serine and threonine metabolism
rop00460
Cyanoamino acid metabolism
rop00630
Glyoxylate and dicarboxylate metabolism
rop00670
One carbon pool by folate
rop00680
Methane metabolism
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01120
Microbial metabolism in diverse environments
rop01200
Carbon metabolism
rop01230
Biosynthesis of amino acids
rop01240
Biosynthesis of cofactors
rop04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ROP_59210 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ROP_59210 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROP_59210 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ROP_59210 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ROP_59210 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ROP_59210 (glyA)
Enzymes [BR:
rop01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ROP_59210 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
SelA
eCIS_core
Motif
Other DBs
NCBI-ProteinID:
BAH54168
UniProt:
C1AYH3
LinkDB
All DBs
Position
6476195..6477490
Genome browser
AA seq
431 aa
AA seq
DB search
MTAVPGTDVNTAPLAELDPEVAQAMAGELARQRDTLEMIASENFVPRAVLQAQGSVLTNK
YAEGYPGRRYYGGCEHVDVVEDLARTRAKELFGADFANVQPHSGAQANAAVLMALMNPGE
KLLGLDLAHGGHLTHGMKLNFSGKLYDVESYGVSKEDHRIDMDEVRKIAVAAQPKVIVAG
WSAYPRHEDFAAFRSIADEVGAYLWVDMAHFAGLVAAGLHPSPVPYADVVSSTVHKTLGG
PRSGLILAKQEWAKKLNSAVFPGQQGGPLMHAIAAKAVSLKIAGTDEFKDRQQRTLTGAK
ILAERLTGSDVVDKGVSVLTGGTDVHLVLVDLRNSQLDGQQGEDLLHEVGITVNRNAVPF
DPRPPMVTSGLRIGTAALASRGFGDEQFTEVADIIGTALAGASDVETLKSRVSKLAADFP
LYEGLEDWRLI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgtgcccggtaccgacgtcaacacggcccccctcgccgaactcgaccccgaa
gtcgcccaggccatggcaggtgagctggcccgtcagcgcgacacgctggagatgatcgcc
tcggagaacttcgttccccgcgccgtcctccaggcgcagggcagcgtcctcaccaacaag
tacgccgaagggtacccgggacgccgctactacggcggctgcgagcacgtcgacgtcgtc
gaggacctcgcccgcacccgggcgaaggaactgttcggcgccgacttcgcgaacgtccag
ccgcactccggcgcacaggccaacgcagcggtcctgatggccctgatgaacccgggtgag
aagctcctcggcctcgacctggcgcacggcggtcacctcacgcacggcatgaagctgaac
ttctccggcaagctctacgacgtcgagtcgtacggggtcagcaaggaagaccaccgcatc
gacatggacgaggtccgcaagatcgccgtcgccgcccagccgaaggtcatcgtcgccggc
tggtccgcgtacccgcggcacgaggacttcgccgcgttccggtccatcgccgacgaggtc
ggggcgtacctgtgggtcgacatggcgcacttcgccggcctggtcgcggccgggctgcac
ccgtcgcccgtgccctacgccgacgtcgtgtccagcaccgtccacaagacgctcggcgga
ccccgctccggtctgatcctcgccaagcaggagtgggcgaagaagctcaactccgccgtg
ttccccggccagcagggcgggccgctgatgcacgccatcgccgcgaaggccgtgtccctg
aagatcgcgggcaccgacgagttcaaggaccgtcagcagcgcaccctcaccggtgcgaag
atcctcgccgagcgcctgaccggctcggatgtcgtggacaagggcgtcagcgtcctcacc
ggcggcaccgacgtgcacctcgtgctcgtcgacctgcgcaactcccagctcgacggccag
cagggtgaggacctcctccacgaggtcggcatcaccgtcaaccgcaatgccgtgccgttc
gacccgcgcccgccgatggtcacgtccggcctccggatcggcaccgccgcgctcgcgtcc
cgcggattcggtgacgagcagttcaccgaggtcgccgacatcatcggcaccgcgctcgcc
ggtgcgtccgacgtcgagacgctgaagtcccgcgtgtcgaagctcgccgccgacttcccg
ctgtacgagggtctcgaggactggcgcctgatctag
DBGET
integrated database retrieval system