Rhodococcus opacus B4: ROP_59340
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Entry
ROP_59340 CDS
T00882
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_59340 (sbcD)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROP_59340 (sbcD)
Archaeal homologous recombinant proteins
ROP_59340 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BAH54181
UniProt:
C1AYI6
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All DBs
Position
6490172..6491353
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AA seq
393 aa
AA seq
DB search
MRILHTSDWHIGRTFHGVDLLADQARVLDAIAALVAEQRVDVVVVPGDVYDRSIPSADAV
TVCNRGFEAIRDAGAVIVATSGNHDSAARLGAGAAFSRAGGLHLMTTVAGIGAPVVLEDA
HGPVAFYGIPYLEPEITRVQLDVPAARSHAEILDAAMDRVRTDLAVRCEHAPRTRSVVLA
HAFVVGAEATGSERSISVGGVETVPASAFGGADYVALGHLHSPQTLTENIRYSGSPLPYS
FGERTHGKAVFLVDLDADGLHSVERVDLPVVRGLKQLTGTVQQLLEDDSFRDAEDCYVSA
VLTDPERPVDAMRSLQTRFPFAVHLEWQRPDGADDLRYRDKVHGRSDLQIARSFLTDVRG
EPSTGEIRLVEAALGFADRAGEDTAEVALEQTA
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctgcacacttcggactggcacatcggacgcacgttccacggggtggacctg
ctcgccgaccaggcccgtgtgctcgacgcgatcgccgctctcgtcgccgagcagcgtgtg
gacgtcgtcgtcgttcccggcgacgtgtacgacaggtcgatccccagcgcggacgccgtc
accgtgtgcaaccgcggattcgaagccatccgcgacgcgggcgcggtcatcgtcgccacg
tccggcaaccacgattccgctgcgcgcctcggcgcgggtgccgcgttctcccgggcgggt
gggctgcacctcatgacgacggtcgccgggatcggcgcgcccgtcgtgctcgaggacgcg
cacggacccgtcgcgttctacggcattccgtatctcgagcccgagatcacacgcgtccaa
ctcgacgtgcctgccgcccggtcgcacgccgagatcctcgacgccgcgatggaccgagtc
cgcaccgacctcgccgtgcgctgtgagcacgcgccgcgcacccgatcggtcgtgctggcc
cacgcgttcgtcgtgggggcggaggccaccgggtcggagcggtccatttccgtcggcggc
gtcgagaccgtgccggcttccgcgttcggcggggccgactacgtcgcgctcggccacctc
cactccccgcagaccctcaccgagaacatccggtactcgggttcgccgctgccgtactcg
ttcggtgagcgcacccacggcaaggccgtcttcctggtggatctcgacgccgacggcctg
cactccgtcgagcgggtcgatctgccggtggtccgcggtctgaagcagctgaccggcacg
gtgcagcagttgctcgaggacgacagtttccgcgacgccgaggactgctacgtgtcggcg
gtgctcaccgacccggaacgtccggtcgacgccatgcgctcgctgcagacccggttcccg
ttcgccgtccacctggagtggcaacgcccggacggcgccgacgatctgcggtaccgggac
aaggtgcacgggcgcagtgatctgcagatcgcccgcagcttcctcaccgatgtgcgcggc
gaaccgtcgacgggcgagatccggctggtggaggcagccctcgggttcgccgaccgggcc
ggcgaggacaccgccgaggtcgcgctggaacagacggcatga
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