Rhodococcus opacus B4: ROP_59350
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Entry
ROP_59350 CDS
T00882
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_59350 (sbcC)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ROP_59350 (sbcC)
Archaeal homologous recombinant proteins
ROP_59350 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
DAGK_cat
Motif
Other DBs
NCBI-ProteinID:
BAH54182
NITE:
ROP_59350
UniProt:
C1AYI7
LinkDB
All DBs
Position
6491350..6494331
Genome browser
AA seq
993 aa
AA seq
DB search
MRLHRLEVEAFGPFAGSVEVDFDRLGADGLFLLHGHTGAGKTTVLDAVAFALYGTVPGAR
KEGKRLLSDHAPTGSVPTVTLEATIAGRHLRLVRSPEFERPKRRGSGTIKENAKATLTWL
DGRGENLSRIPDIADQVGRLMGMSADQFFQVVLLPQGEFAKFLRADTEERGQLLERLFDT
TRFGTVEEWFLDRRRTSAHELDEHQRAVDVLLARVATAAGIEGGADADPVTWAHKLEDEA
RETRDLAADELQKARRRAAGARDALTEARRVLELQNRRRRAEIELDALASGAGQRAVLAA
ELADARRADPVAAAVRDADAARADAAAAARNVGTITAGLRATVGGADLVAELSWPPTADE
RERIRAGIRTWRDEIVRLDGALAESVAAERLAVEVEQLRARQIELTEAADALSRERDQLP
LALRDAEKALDSAEKARAALPGLVDARDRAADAASAAADLRTRRVERDRLERAVHEARER
HQDAREHWLDLLQRRIAGMAAELAGTLADGVPCQVCGSPEHPRPAEPSDLSVTKADEDDA
RAAEQRAAAALTTATENLGAAERAIDVLVQRGGDGEAHELAQALSAAEAAVGEATALGDQ
VERRSATLTELRDRERRLQERSRGVGADAATVAERITASTTQLGEIRARVNRASGDDPSV
EDRRARLDTLAEAASELLDARDAGAGAESAARELAAKADALAGDAGFGSIDDALAAVRTA
ARRSEIEAALTAARDAEVGARRVLDDPEVAAVADAEPVELAAVQHAHDAAAELVDVAVAA
ASDAERRLLDLERYVGHLDQTAEAIAPVQAAHEELAALAEVIAGRGQNARKMSLRSYVLA
ARLEEVAVSASARLGRMSDGRYEFVHSDEAGPRGRRGGLGLDIRDDYTGVVRSAKTLSGG
ESFLASLSLALGLADVVAAESGGVVLDTVFIDEGFGTLDADTLDSVMGVLDELRDGGRVV
GIVSHVDEMRQRIPSRLHVIRGRTGSTLEVVAG
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgcatcgactggaggtcgaagccttcgggccgttcgccggatccgtggaagtc
gacttcgatcggctcggtgccgacgggctgtttctgctgcacggtcataccggggccgga
aagacgacggtcctggacgcggtggcgttcgcgttgtacggcaccgtgcccggagcgcgg
aaggagggcaagcgcctcctgtccgatcacgcgcccaccggatccgtcccgacggtgacc
ctcgaggcgacgatcgccggccggcatctgcggctcgtccgcagcccggagttcgagcgg
cccaagcgtcgtgggtcgggcacgatcaaggagaacgcgaaggccacgctgacctggctc
gacggtcgcggcgagaacctgtcgcggatccccgacatcgccgaccaggtcgggcggctg
atgggcatgagcgccgaccagttcttccaggtggtgctgctgccgcagggcgagttcgcg
aagttcctgcgcgccgacacagaggagcgcggtcagctgctggaacggctgttcgacacc
acccgattcgggacggtggaggaatggttcctcgaccgcaggcgcaccagcgcccacgaa
ctcgacgagcaccagcgggccgtcgacgtgctgctcgcgagggtcgccaccgccgccggg
atcgagggcggcgccgacgccgatccggtgacctgggcccacaagctcgaggacgaggcg
cgcgaaacccgcgacctcgcagcggacgagctgcagaaggccaggcgccgggcggcgggt
gcccgcgacgcgctcacggaggcgcgccgcgtcctcgaactgcagaaccgcaggcggcga
gccgagatcgaactcgacgccctcgcgtcgggtgccggccagcgagccgtacttgccgcc
gaactggcggatgcgcgccgggccgatcccgtcgcggcggcggtgcgggacgccgacgcc
gcccgggccgacgccgccgcagcggcgcggaatgtcgggacgatcaccgccggactgcgc
gcgacggtgggcggcgccgacctcgtcgcggagttgtcctggccgccgaccgcggacgaa
cgcgaacgcatccgggccggtatccgcacctggcgtgacgagatcgtgcgcctcgacggg
gcactcgccgaatccgttgccgcagaacggctcgccgtcgaggtggagcagttgcgggcc
cggcagatcgaactcaccgaggccgctgacgcgctgtcgcgggagcgggaccagctgccg
ctcgcgctgcgggacgcggagaaggcgctcgactcggcggagaaggcccgcgccgcgctg
cccggactcgtcgacgcgagggaccgcgcagccgacgccgcctccgctgcggcggatctg
cgcacccgccgagtcgagcgggatcggctcgaacgggcggtgcacgaggcccgggagcgg
catcaggacgcgcgggaacactggctcgacctgctgcaacgtcggatcgcgggcatggcc
gccgagctggcgggcacgctcgcggacggtgtcccgtgccaggtgtgtggttcacccgag
cacccgcggcccgccgaaccgtccgatctgtcggtcacgaaggccgacgaggacgacgcg
cgtgcggcggagcagagagctgcggcggcgctgacgaccgcgaccgagaacctgggcgcg
gccgagcgcgcgatcgacgtgctcgtgcagcgcggtggcgacggcgaagcgcacgaactc
gcgcaggcactctcggccgcggaggcggcggtgggggaggcgactgcgctcggcgaccag
gtggagcgccggtccgcgactctcaccgaactgcgggaccgcgagcgccggctgcaggaa
cggtcgcggggggtcggtgccgacgccgccacggtggccgagaggatcaccgcgagcacg
acgcagctcggcgagattcgcgcccgggtgaatcgggcgtcgggcgacgacccgagcgtc
gaggatcggcgcgcacgcctcgacaccctcgccgaggcggcgtcggaactgctggacgcg
cgggacgccggagccggcgccgagtccgcggcccgtgaactcgcggccaaggccgacgcg
ctcgccggggacgccggtttcggcagcatcgacgacgccctggccgcggtccggacggct
gcccgccggagtgagatcgaggctgccctcacggcggcgcgggacgccgaggtgggggcg
cgccgcgtgctcgacgaccctgaggtcgccgctgtcgccgacgcggaaccggtggaattg
gcggccgtccagcacgcgcacgacgcggcggcggagctcgtggacgtcgccgtcgcggct
gcgtccgacgccgagcgccgactgctcgatctggaacggtacgtcgggcacctcgaccag
accgccgaggcgattgccccggtgcaggccgcacacgaagaactggccgcgctggcggag
gtgatcgcgggccggggtcagaacgccaggaagatgtcgctgcggtcgtatgtgctggcg
gcccggctggaagaggtcgcggtgtcggcgtctgcgcggctcggccggatgtcggacggg
cgctacgaattcgtccacagcgacgaggccggtccgcgaggccgccgcggcggtctggga
ctggacatccgcgacgactacaccggggtggtgcggtcggccaagaccctgtccggtggc
gagtcgttcctggcgtcgttgtcgctggcgctcggtctcgccgacgtggtggcggccgag
tcgggtggggtcgtgctcgacacggtgttcatcgacgagggattcggcaccctcgacgcg
gacaccctcgactcggtgatgggtgtcctcgacgagctacgcgacggcggccgggtggtg
gggatcgtcagtcacgtcgacgagatgcgtcagcggatcccgagcaggctgcacgtgatc
cgcggacgcaccggctccaccctggaggtggtggccggctga
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