Rhodococcus opacus B4: ROP_60240
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Entry
ROP_60240 CDS
T00882
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00300
Lysine biosynthesis
rop01100
Metabolic pathways
rop01120
Microbial metabolism in diverse environments
rop01230
Biosynthesis of amino acids
Module
rop_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ROP_60240 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rop01002
]
ROP_60240 (dapE)
Enzymes [BR:
rop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
ROP_60240 (dapE)
Peptidases and inhibitors [BR:
rop01002
]
Metallo peptidases
Family M20
ROP_60240 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BAH54271
UniProt:
C1AZK0
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All DBs
Position
6586213..6587286
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AA seq
357 aa
AA seq
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MSTLDLHADPIDLTAALVDIPSVSHDESAIAAAVESALREQTTGFEVIRNGNAVLARTDR
GLESRVMLAGHLDTVPIADNVPSRREGDLLHGCGTVDMKSGDAVFLHLAATVENLAHDLT
LVFYDCEEIAAVHNGLGRIEREIPEWLRADVAILGEPTGGLIEAGCQGTLRVTLTTRGTR
AHSARSWLGDNAIHRFAPVLQRLSDYTARSVDIDGCVYREGLSAVRIAGGVAGNVVPDAA
EMDVNFRFAPDRSAEQAIDHVREVFEGLELGFEVTDLSPGALPGLTDPAAAALIEAAGGE
FRAKYGWTDVSRFSALGIPAVNYGPGDPNLAHKRDEHVPVQQITDVAAVLRAYLSTP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacactcgacctccacgccgatcccatcgacctcaccgccgccctggtggacatc
ccgagcgtctcccacgacgagtcggcgatcgccgccgccgtcgagtcggctctgcgggaa
cagaccaccggtttcgaggtcatccgcaacggcaacgcggtcctcgcccgcaccgatcgg
ggactggagagccgggtgatgctcgccgggcacctcgacaccgtgccgatcgcggacaac
gtgccctcccggcgtgagggcgacctgctgcacgggtgtggaacggtcgacatgaaatcg
ggcgacgcggtgttcctgcatctcgcagccaccgtggagaacctcgctcacgacctgacg
ctggtgttctacgactgcgaggagatcgcggccgtccacaacgggctcggacggatcgaa
cgtgagatccccgagtggctgcgcgcggacgtcgcgatcctgggcgagccgacgggaggg
ctcatcgaggcgggctgccagggcacgctgcgggtgacgctgaccacccgcggcacccgc
gcgcactccgcgaggtcgtggctcggcgacaacgcgatccaccggttcgccccggtactg
cagcgactgtcggactacaccgcgcggtcggtggacatcgacggctgcgtgtaccgggag
gggctgtccgccgtgcggatcgccggcggcgtcgcgggcaacgtggtcccggacgccgcg
gagatggacgtgaacttccgcttcgcgcccgaccgcagcgccgagcaggccatcgaccac
gtgcgcgaggtattcgagggactcgagctgggtttcgaggtcaccgacctgtcgccgggt
gccctgcccgggctgacggatccggcggccgcggccctcatcgaggcggcgggcggcgag
ttccgcgccaagtacgggtggacggacgtgtcccggttctccgccctcggcatcccggcc
gtcaactacggtccaggcgatccgaacctcgcgcacaagcgggacgagcacgttcccgtc
cagcagatcaccgacgtggcggccgtgctccgcgcgtatctgagcaccccgtga
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