Rhodococcus opacus B4: ROP_60930
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Entry
ROP_60930 CDS
T00882
Symbol
fadD
Name
(GenBank) long-chain fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00061
Fatty acid biosynthesis
rop00071
Fatty acid degradation
rop01100
Metabolic pathways
rop01212
Fatty acid metabolism
rop02024
Quorum sensing
rop04146
Peroxisome
Module
rop_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ROP_60930 (fadD)
00071 Fatty acid degradation
ROP_60930 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ROP_60930 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROP_60930 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rop01004
]
ROP_60930 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_60930 (fadD)
Enzymes [BR:
rop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ROP_60930 (fadD)
Lipid biosynthesis proteins [BR:
rop01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ROP_60930 (fadD)
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of breast milk
ROP_60930 (fadD)
Exosomal proteins of breast cancer cells
ROP_60930 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAH54340
UniProt:
C1AZR9
LinkDB
All DBs
Position
complement(6661928..6663745)
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AA seq
605 aa
AA seq
DB search
MREFSVPQSFSIPEDASMADTVFRHAEEDPKFVPFKRPGSGGWVDVTAAEFAEQVSAVAK
GLIASGIELGDRVAILSATRYEWVVVDYAIWTAGGCTVAIYETSAPDQAKWILEDSGTSL
LVVENANHADALKVVTDAAPDLKEVLQIEGGASEATGTSSSAIDELSKRGESITDEQLHE
RRHQVRASSPATLIYTSGTTGRPKGVQLTHSNFYAESAAVKLALSDAMYAGRRTLMFLPL
AHVFARAISFGAFDAKVTVAHTADLTTLLDQFAAFKPHFILSVPRVFEKVYNSAKQKAYD
GGKGSIFEKASATAIAYSEAQDNGGAGLGLKLKHALFDKLVYSKLRTALGGECDRAVSGG
AALGARLGHFFRGIGVPVYEGYGLTETSAAVSVNTTRAQKVGTVGKPIDGHAAKIGEDGE
LLLKGPVVFGGYWHNDQATADSIRDGWFHTGDLGSIDEEGYISITGRKKEIIVTAGGKNV
APAVLEDALRAHPLISQCLVVGDGKPFIGALITLDSETLPGWKERHGLAADTPVSELVKN
PDLVAEIDEAVAEGNKKVSNPERIKKYRILEVDFTQETGELTPTLKLKRNVIHKEHGAAI
EAIYA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgaattctcggtaccgcagtcgttctcaattccggaggacgcctccatggcggac
acggtcttccgtcacgccgaggaggacccgaagttcgttccgttcaagcgcccgggcagc
ggcgggtgggtagacgtcaccgccgccgagttcgcggagcaggtctccgccgtcgcgaag
ggcctcatcgcgtcgggcatcgaactcggtgaccgcgtcgcgatcctctccgcgacccgg
tacgagtgggtcgtcgtcgactacgcgatctggacggcaggcgggtgcaccgtcgccatc
tacgagacgtccgcacccgatcaggccaagtggatcctcgaggactccggcacgtcgctg
ctggtcgtcgagaacgcgaaccatgccgacgcgctgaaggtcgtcaccgacgccgcgccg
gacctgaaggaggtcctgcagatcgaaggcggggcaagcgaagcgacggggacatcgtcg
agcgcgatagatgagctgtcgaagcgcggggagagcatcaccgacgagcaactgcacgag
cgtcgccaccaggtgcgcgcgtcgtcccccgcgaccctcatctacacgtcgggcaccacg
ggccgccccaagggcgtgcagttgacgcactccaacttctacgccgagtcggcggccgtg
aagctggcgctcagcgacgcgatgtacgcgggcaggcgcaccctgatgttccttcccctc
gcgcacgtcttcgcgcgtgccatctcgttcggggcgttcgacgccaaggtcacggtcgcg
cacaccgccgacctcaccacgctgctcgaccagttcgcggcgttcaagccgcacttcatc
ctgtcggtgccgcgcgtgttcgagaaggtgtacaactccgccaagcagaaggcgtacgac
ggcggcaagggcagcatcttcgagaaggcgtccgccaccgcgatcgcgtacagcgaggcg
caggacaacggcggcgccgggctgggactcaaactcaagcacgccctgttcgacaagctc
gtctactcgaagctgcgcaccgcgctcggcggcgagtgcgaccgcgccgtctccggtggc
gccgcgctcggtgcacgcctcggccacttcttccgcggcatcggcgtcccggtgtacgag
ggttacggtctcaccgagaccagcgccgccgtctcggtgaacaccacccgcgcacagaag
gtcggcaccgtcggcaagccgatcgacggccacgccgcgaagatcggcgaggacggcgaa
ctgctgctgaagggtcccgtcgtgttcggcgggtactggcacaacgatcaggccaccgcg
gattcgatccgggacggctggttccacaccggcgacctcggctcgatcgacgaagagggc
tacatctcgatcaccggccgcaagaaggaaatcatcgtcaccgcgggcggcaagaacgtg
gcgcccgcggtcctcgaggacgccctccgcgcgcacccgctgatcagccagtgcctcgtg
gtcggtgacggcaagccgttcatcggcgctctcatcaccctcgactccgagaccctgccc
ggctggaaggaacgtcacgggctggccgccgacacccccgtgtccgaactggtgaagaac
cccgacctggtcgccgagatcgacgaggcggtggccgagggcaacaagaaggtgtccaac
ccggagcggatcaagaagtaccgcatcctcgaggtcgacttcacgcaggagaccggtgag
ctcacgcccacgctgaagctcaagcggaacgtcatccacaaggagcacggcgcggccatc
gaggccatctacgcgtaa
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