Rhodococcus opacus B4: ROP_62150
Help
Entry
ROP_62150 CDS
T00882
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ROP_62150 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rop03021
]
ROP_62150 (rpoA)
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_62150 (rpoA)
Enzymes [BR:
rop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ROP_62150 (rpoA)
Transcription machinery [BR:
rop03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ROP_62150 (rpoA)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ROP_62150 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
BAH54462
UniProt:
C1B041
LinkDB
All DBs
Position
6814746..6815807
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPTLTEEVIADNRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGAVTAGDIVPPAGVTVNN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLVLDVETKNSITARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVGRTESDLLDIRNFGQKSIDEVKVK
LHSLGLALKDSPASFDPTTVAGYDAATGTWSDTDAGSFGDAEGTEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttctcagcgacccacgctgaccgaagaggtcatcgctgacaaccgctcgaag
ttcgtcatcgagcccctcgagccaggcttcgggtacaccctcggcaattcgctccgccgc
acgctgctctcgtcgattcccggcgctgctgtcaccagcatccgcatcgatggcgttctg
cacgagttcaccacagttcccggtgtgaaggaagatgtcaccgacatcatcctgaacctc
aagggcctcgtcgtgagctccgaagaggacgagccggtcaccatgtacgtccgcaagcag
ggccccggcgctgtgaccgcaggcgacatcgtgcccccggccggcgtcaccgtgaacaac
ccggatctgcacatcgccaccctgaacgacaagggaaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctatgtccccgccgtccagaacaaggcgtccggcgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtggaggcc
acccgtgtcgagcagcgcaccgacttcgatcggctcgtgctcgatgtggaaaccaagaac
tccatcaccgctcgggacgcgctcgcttctgcgggcaagaccctggttgagctcttcggc
ctggcccgtgagctgaacgtcgaagcagaaggcatcgagatcggaccctcgcccgccgag
gccgatcacattgcttcgttcggactgcccatcgaggacctggacctgacggtccgttcc
tacaactgcctcaagcgcgagggtgttcacaccgtcggtgagcttgtcggccgtaccgag
tccgatctgctcgacatccgcaacttcggacagaagtccatcgacgaggtgaaggtcaag
ctgcattcgctcggcctggccctcaaggacagccccgcatccttcgatcccaccaccgtt
gccggctacgacgccgccaccggaacgtggagcgacacggacgccggttccttcggtgat
gccgagggcaccgaggactacgccgagaccgaacagctgtag
DBGET
integrated database retrieval system
