Rhodococcus opacus B4: ROP_63050
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Entry
ROP_63050 CDS
T00882
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00020
Citrate cycle (TCA cycle)
rop00190
Oxidative phosphorylation
rop00650
Butanoate metabolism
rop00720
Other carbon fixation pathways
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01120
Microbial metabolism in diverse environments
rop01200
Carbon metabolism
Module
rop_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rop_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rop_M00149
Succinate dehydrogenase, prokaryotes
rop_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
ROP_63050 (sdhA)
00650 Butanoate metabolism
ROP_63050 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
ROP_63050 (sdhA)
00720 Other carbon fixation pathways
ROP_63050 (sdhA)
Enzymes [BR:
rop01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
ROP_63050 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
FAD_oxidored
DUF6020
Motif
Other DBs
NCBI-ProteinID:
BAH54552
UniProt:
C1B157
LinkDB
All DBs
Position
complement(6910984..6912735)
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AA seq
583 aa
AA seq
DB search
MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIAITETENGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHIPEEVLDEKLPDIMEFSRTYLGVDPVKEPVPVYPTCHYVMGGIP
TRINGEVLRNNDEIVQGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEHANN
SEFVALPESPEKMVDEWMATILSDHGHERVADIRTELQQSMDNNASVFRTEERLTQALKD
VRALKERYNHITVQDKGKRYNSDLLEAVELGFLLEMAEVTVVGALNRKESRGGHAREDFP
DRNDAEYMKHTMAYKEGDGLLSDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacaccgttatgacgtggtcatcgtcggtgccggcggcgccggcatgcgcgca
gcgatcgaggccggtccccgcgcccgcaccgccgtactgaccaagctctaccccacccgc
agccacaccggcgcggcccagggcggcatgtgcgccgcgctggcgaacgtggaggaagac
aactgggagtggcacaccttcgacacggtcaagggcggcgactacctcgccgaccaggac
gccgtcgagatcatggccaaggaggccatcgacgcggtgctcgacctcgagaagatgggt
ctgccgttcaaccgcacgcccgagggcaagatcgaccagcgtcgtttcggtggtcacacc
cgcgatcacggtaaggcccccgtgcgccgcgcatgttatgccgcggaccgcaccggtcac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgctctcgacatcgcgatcaccgagacggagaacggcccggtcgcgaccggcgtc
atcgcctacgagctggccaccggcgagatccacgtcttccacgcgaagtccatcgtgttc
gccaccggcggctcgggacgcatgtacaagacgacgtccaacgcacacaccctcaccggt
gacggcatgggcatcatcttccgcaagggcctcccgctggaggacatggagttccaccag
ttccatcccacaggcctggccgggctcggcatcctcatctccgaggccgtgcgcggtgag
ggcggcatcctccgcaacgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcaccccgtgacatcgtcgcgcggtcgatggtgctcgaggtcctcgaggga
cgcggcgcgggaccgaacaaggactacgtctacatcgacgtgacccacatccccgaggaa
gtcctcgacgagaagctccccgacatcatggagttctcccgcacctacctcggtgtggac
ccggtcaaggaacccgtgccggtgtaccccacctgccactacgtcatgggcggcatcccc
accaggatcaacggtgaggtcctccgcaacaacgacgagatcgtccagggcctgtacgcc
gccggcgagtgcgcctgcgtgtccgtccacggcgcgaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggacgccgcgccggcatcgccgccgccgagcacgccaacaac
agcgagttcgtcgccctgccggagtcgcccgagaagatggtcgacgagtggatggccacc
atcctgtcggaccacggccacgagcgggtcgcggacatccgcaccgagctgcagcagtcg
atggacaacaacgcttcggtgttccgcacggaggagcgtctcacccaggcgctcaaggac
gtgcgcgcgctgaaggagcgctacaaccacatcacggtgcaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctcggcttcctcctcgaaatggcggaggtcacc
gtcgtcggcgcgctgaaccgcaaggaatcgcgcggcggccacgcccgcgaggacttcccg
gaccgcaacgacgccgagtacatgaagcacacgatggcatacaaggagggcgacggcctg
ctctccgacatccgtctcgactacaagccggtagtccagacccgttacgagccgatggag
cgtaagtactga
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