Rhodococcus opacus B4: ROP_64430
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Entry
ROP_64430 CDS
T00882
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03420
Nucleotide excision repair
rop03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ROP_64430 (uvrD2)
03430 Mismatch repair
ROP_64430 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_64430 (uvrD2)
Enzymes [BR:
rop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ROP_64430 (uvrD2)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ROP_64430 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
ROP_64430 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BAH54690
UniProt:
C1B1J5
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All DBs
Position
7053028..7055154
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AA seq
708 aa
AA seq
DB search
MSAAGAAEVTTTGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIAHLVASGHVAAGQ
VLAVTFTARAAGEMRGRLRSLGIGDGGAQVQARTFHAAALRQLRYFWPQVVGDTEWRLLD
RKFAVVSSAAGRVGLSTSTESIRDLASEIEWAKASLIAPEDYPRAVAKLRREAPVDAAKV
AEVYHGYEQLKARGQDGMLLDFDDLLLHTAAALEEHSAVAEEFRDRYRCFVVDEYQDVTP
LQQRVLDAWLGERDDLTVVGDANQTIYSFTGATPNYLLDFSRRFPEATVVRLERDYRSTP
EVVSMANRVIGAARGRIAGTRLQLIGQRDSGPEPSFVEFDDEPAEAAGVARTIKRLIASG
TPAAEIAVLYRINAQSEVHEQALTKLDIPYQVRGGEGFFTRTEVRQAVAALRQAAGRDDL
PDAVGADLVTLVRAVLVPLGLTDAEPAGAQARERWASLSALVALTEEQLTQDPELTLDAL
LRELSLRAEARHPPVVQGVTLASLHAAKGLEWDAVFLVGLTDGTLPIQHVLGDSNSAPDE
AAVEEERRLLYVGVTRAREHLQMSWALSRNEGGRKSRRRSRFLHGLIPEDSPASRIAAPV
KSNKKRPRCRLCGKPLIGTTATMLGRCEGCPSNVDVELLDSLRSWRLEKSRELKVPAYVV
FSDNTLTALAEQRPQDDRGLVAIPGIGAKKLEQFGEDVLGVIKGSGSR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagccggcgcagcagaggtgacgactaccggtctcgaccccgaacagtccgca
gcggtcctcgctccccgggggccggtgtgcgtgctggcgggcgccggaacaggcaagacc
cggaccatcacccggcggatcgcgcacctcgtggccagtgggcacgtcgccgcggggcag
gtgctggcggtgacgttcacggcgcgcgcggcaggtgagatgcgcggccggctgcgcagc
ctgggaatcggcgacgggggagcgcaggttcaggcgcgcacgttccacgcggccgcgctg
cggcagctgcggtacttctggccgcaggtggtcggcgacacggaatggcggctgctggac
cgcaagttcgcggtcgtgtcgtccgccgccgggagagtcggcctgtccacgagcacggaa
agtatccgagacctggcgagcgagatcgagtgggccaaggcctcgctgatcgcgcccgag
gactacccgcgcgcggtggcgaagttgcgccgggaagcgccggtcgacgccgccaaggtc
gccgaggtgtatcacggctacgaacagctcaaggctcgcggccaggacggaatgcttctc
gatttcgacgacctcctgctccacacggcggcggcactcgaagaacattcggccgtcgct
gaggagttccgcgaccgctatcgctgcttcgtcgtcgacgagtaccaggacgtcaccccg
ctgcagcagcgtgtcctcgacgcgtggctcggggagcgggacgacctcaccgtcgtcggc
gacgccaaccagaccatctactcgttcaccggcgccacaccgaattacctgctcgacttc
tcgcgccggttccccgaggccaccgtcgtgcgcctcgagcgcgactaccgttcgaccccc
gaggtggtgtcgatggcgaaccgggtgatcggagcggcgcgcggccggatcgcgggcacc
cgtctgcaactgatcgggcagcgcgactccgggccggaaccgagtttcgtcgagttcgac
gacgaaccggccgaggccgccggggtggcgcgcaccatcaagcggctcatcgcgtccggc
actccggcggcggagatcgcggtcctgtaccggatcaacgcccagtccgaggtgcacgag
caggcgctgacgaaactcgacatcccgtaccaggtgcggggcggagagggcttcttcacc
cgcaccgaggtgcgtcaggccgtggcggcgctgcgtcaggccgcgggccgcgacgacctg
cccgacgcggtcggcgccgacctggtcacgctcgtgcgcgcggtcctcgtcccgctgggg
ctcacggacgccgaaccggcgggtgcgcaggcccgcgagcgatgggcctccctgtcggcg
ctcgtcgcgctcaccgaggaacagctgacccaggatccggaattgacgctcgacgcgctg
ttgcgtgagctgagcctgcgggcggaggcgcggcacccacccgtcgtgcagggtgtgacc
ctcgcgtccctgcacgccgcgaagggcctcgaatgggacgccgtgttcctcgtcggcctc
accgacggaacgctgcccatccagcacgtgctcggcgactccaactcggcgcccgacgaa
gcggccgtcgaggaggagcgccggctgctgtacgtcggcgtcacccgcgcccgcgagcac
ctgcagatgtcctgggcgctgtcccggaacgaaggcgggcgcaagtcgcggcgccgttcg
cggttcctgcacggactcatccccgaagactcaccggcctcccggatcgcggcgccagtc
aagagcaacaagaagcgtccacggtgccggctctgcggaaaaccgctgatcgggacgacc
gcgaccatgctcggccgctgcgagggatgcccgtcgaacgtcgacgtggagctgctcgac
tcgctgcggtcgtggcggctcgagaagtcgagggagctgaaggtcccggcgtacgtggtg
ttcagcgacaacacgttgacggctctcgcggagcaacgcccgcaggacgaccgcggactc
gtcgcgattcccgggatcggcgcgaagaagctcgagcagttcggcgaagacgtcctcggt
gtgatcaagggaagcggcagtcgctga
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