Rhodococcus opacus B4: ROP_65570
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Entry
ROP_65570 CDS
T00882
Name
(GenBank) putative amino acid lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop00260
Glycine, serine and threonine metabolism
rop00270
Cysteine and methionine metabolism
rop00450
Selenocompound metabolism
rop00670
One carbon pool by folate
rop01100
Metabolic pathways
rop01110
Biosynthesis of secondary metabolites
rop01230
Biosynthesis of amino acids
Module
rop_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ROP_65570
00270 Cysteine and methionine metabolism
ROP_65570
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
ROP_65570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ROP_65570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_65570
Enzymes [BR:
rop01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
ROP_65570
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
ROP_65570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BAH54804
UniProt:
C1B2N7
LinkDB
All DBs
Position
7173919..7175043
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AA seq
374 aa
AA seq
DB search
MSGDSTRCVKAVAVEQVPGSPMQRGPVFAAPYQLSADEGTETDTYARASNPGWRDLESAL
AALEGAAGALVVGSGMSAITVVLRSLLTAGDTVVVPSDGYYQVRAYARERLEPMGITVHE
LRTADMAGEGAAALLASAEGTTVVVAETPANPSLDVVDLRAVSEQCANAGAVLVVDNTTA
TPLGQQPLELGADVVVASGTKTLSGHSDLLMGYIAASDADFLAGMERERALSGTVLGPFE
TWLAHRSLGTAGLRFERQCANALALATVLETHPAAHRVRYPGLPGDPAHAVAAGQMSRFG
GLVTFEVDSADRFHRLVAGSDLLVPATSFGGIHTSADRRARWGDPVPDGFVRLSCGIEDT
DDLVADLESALSAL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgagtggtgattcgacccgctgcgtcaaagccgttgcagtggaacaggttccaggttcg
ccgatgcagagggggccggttttcgcggcgccctatcagctgagcgcggacgaggggacc
gaaaccgacacctacgcgcgcgcctccaacccgggctggcgcgacctcgagtcggcgctg
gcggcgctcgagggcgccgcaggcgcactggtcgtcggctccgggatgtcggcgatcacc
gtcgtgctgcggagtcttctcaccgccggtgacaccgtcgtcgtgccgtcggacggctac
taccaggtgcgcgcgtacgcgcgggagcgtctggagccgatgggcatcaccgtgcacgaa
ctgcggactgccgacatggccggcgaaggggccgccgcactgctggcctccgcggagggg
acgacggtcgtggtggccgagaccccggccaacccgtccctggacgtggtggatctgcgg
gccgtctccgagcagtgcgcgaacgcgggcgccgttctcgtggtggacaacacgaccgcc
accccgctcggccagcaaccgctcgagctcggcgcggacgtcgtagtcgccagcggcaca
aagactctgagtggtcacagcgatctgctcatggggtacatcgctgcgtcggacgccgat
ttcctggccggtatggaacgggagagggcgctgtcgggcacggtgctgggccccttcgag
acgtggctcgcccaccggagcctcggcacggcgggtctgcgattcgagcggcaatgcgcc
aacgccctggcgctcgcgaccgtgctggagacgcacccggcggcccaccgcgtccgctac
ccggggctgcccggtgatcccgcgcatgccgtcgccgccgggcagatgagccggttcggc
gggctggtgacgttcgaggtcgactccgccgaccggttccaccggctcgtcgccggcagc
gacctcctcgtaccggcgacgagtttcggtggcatccacaccagcgccgaccgccgggcc
cgatggggtgaccccgtgcccgacgggttcgtgcggctctcgtgtggaatcgaggacacc
gacgacctcgtcgccgatctcgagagtgcactgtccgcattgtga
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