Rhodococcus opacus B4: ROP_65850
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Entry
ROP_65850 CDS
T00882
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop02024
Quorum sensing
rop03060
Protein export
rop03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ROP_65850 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ROP_65850 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ROP_65850 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rop02044
]
ROP_65850 (ffh)
Enzymes [BR:
rop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ROP_65850 (ffh)
Secretion system [BR:
rop02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ROP_65850 (ffh)
Eukaryotic Sec-SRP protein
ROP_65850 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
TctA
APS_kinase
AAA_22
ArsA_ATPase
Zeta_toxin
AAA_31
AAA_16
AAA_18
NPHP3_N
AAA_33
AAA_24
MeaB
MobB
NTPase_1
Thymidylate_kin
CLP1_P
NACHT
ATP_bind_1
TsaE
6PF2K
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAH54832
UniProt:
C1B2R5
LinkDB
All DBs
Position
7204941..7206548
Genome browser
AA seq
535 aa
AA seq
DB search
MTSGAHSVFESLSDRLTGALKDLRGKGRLSGADIDATCREIRLALLEADVALPVVRSFIA
KIKERAKGVEVSAALNPAQQVVKIVNEELVGILGGETRRLAFAKTPPTVIMLAGLQGSGK
TTLAGKLAKWLRDQGHTPLLVACDLQRPGAVTQLQIVGERAGATVFAPHPGTSIGGGDNE
LGITAADPVEVARAGVEEARNKQFDVVIVDTAGRLGIDADLMAQAAGIRDAVNPDETIFV
LDAMIGQDAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASTGEKLE
DFDVFHPDRMASRILGMGDVLSLIEQAEQVFDQKQAEATAQKIGSGQLTLEDFLEQMMAV
RKMGPIGNLLGMLPGAGQMKDALANVDEKQLDRVQAIIRGMTPAERDDPKIINASRRLRI
ANGSGVKVSDVNQLVDRFFEARKMMAAMAGRMGMPGARKPQRSKKGKKGKKGGKGPTPPK
VRGGFPGGLPGGFPGMPPGGLPAGMPDLSNMPKGLDELPPGLEGIDLSQLKLPKK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggagcgcactcggtgttcgaatccctttccgacaggttgaccggagccctc
aaggatctgcgtggcaagggtcgcctttccggagccgacatcgatgccacctgccgtgag
atccggttggccctgctcgaggcagacgtcgcgctgcccgtcgtccgctcgttcatcgcc
aagatcaaggaacgcgccaagggcgtcgaggtctcggcggcgctgaacccggcgcagcag
gtcgtcaagatcgtcaacgaggaactcgtcggaatcctcggcggcgagacccgccgactg
gcgttcgcgaagacgccgccgacggtcatcatgctcgccggcctgcagggttccggtaag
accaccctcgccgggaagctcgcgaagtggctgcgcgaccaggggcacaccccgctgctc
gtcgcctgcgacctgcagcggcccggcgccgtcacccagctgcagatcgtcggtgagcgc
gcgggcgccacggtgttcgcgccgcacccgggcacgtccatcggcggcggcgacaacgaa
ctgggcatcaccgcggccgacccggtcgaggtggcccgggccggtgtcgaggaagcccgc
aacaagcagttcgacgtggtcatcgtcgacaccgcgggtcgcctgggtatcgacgccgac
ctgatggcgcaggcggcgggcatccgcgacgccgtgaaccccgacgagacgatcttcgtt
ctcgacgcgatgatcggtcaggacgcggtcagcacggccgaggcgttccgcgagggcgtc
gggttcaccggtgtcgtgctcacgaagctcgacggcgacgcccgtggtggcgccgcgctc
agcgtccgcgaggtcaccgggcagcccatcctgttcgcgtccacgggtgagaagctcgag
gacttcgacgtcttccaccccgaccgcatggccagccgcatcctcggcatgggtgacgtg
ctcagcctcatcgagcaggcggagcaggtcttcgaccagaagcaggccgaggcgaccgcg
cagaagatcggctccggccagctgactctcgaggacttcctcgagcagatgatggccgtc
cgcaagatgggccccatcggcaacctgctgggcatgctcccgggtgcggggcagatgaag
gacgccctcgctaacgtcgacgagaagcagctcgaccgggtgcaggcgatcatccgcggt
atgacccccgccgagcgcgacgacccgaagatcatcaacgcgtcccgccgcctgcggatc
gcgaacggctccggtgtcaaggtgtccgacgtcaaccagctggtggaccgcttcttcgag
gcccgcaagatgatggccgcgatggccggccgcatgggcatgccgggtgcgcgcaagccg
cagcgcagcaagaagggcaagaagggcaagaagggtggcaagggacccacgccgccgaag
gtgcgcggaggattccccggcggcctgcccggcgggttcccgggtatgccgcccggaggg
ctccccgcggggatgcccgatctgtcgaacatgccgaagggcctcgacgagttgccgccg
ggtctcgaaggcatcgatctgtcccagctgaagctgccgaagaagtag
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