Rhodococcus opacus B4: ROP_66900
Help
Entry
ROP_66900 CDS
T00882
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rop03016
]
ROP_66900 (truB)
Enzymes [BR:
rop01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ROP_66900 (truB)
Transfer RNA biogenesis [BR:
rop03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ROP_66900 (truB)
Prokaryotic type
ROP_66900 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
LPP
Motif
Other DBs
NCBI-ProteinID:
BAH54937
UniProt:
C1B320
LinkDB
All DBs
Position
7306715..7307632
Genome browser
AA seq
305 aa
AA seq
DB search
MSAREKPSSGLVGAGLLIVDKDAGVTSHDVVARCRKLLGTRKVGHAGTLDPMATGVLVLG
VERATKLLGLLALTTKAYTATIRLGQATTTDDAEGEIVASADASGVRDEEIAAQVRTLTG
DIQQIPSSVSAIKVDGRRAHALIRAGEEFELAPRSVTVSRFDVVARRTEGPFVDLDVEVE
CSSGTYVRALARDLGIALIGVGGHLTSLRRTRVGPFTLEHARTLEQLAEEPGVSLDIDSA
AQTAFPHRQIDADEAEAISQGRWLEPIGMKGVYAAIDPSGHTIALLQERGKRASSVMVVR
PATLR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcacgtgaaaagccttcctccggtctcgtcggcgccggactgctcatcgtcgac
aaggacgcgggcgtcaccagccacgacgtggtggcccggtgccgcaagctgctcggcacc
cgaaaggtcggtcacgcgggcactctggacccgatggccacgggagtgctggtgctcggt
gtggagcgggcgacgaagctgctggggcttctcgcgctcaccaccaaggcgtacacggcc
acgatccggttggggcaggccaccaccaccgacgacgcggagggtgagatcgtcgcgtcg
gcggatgcatccggcgtgagggacgaggagatcgccgcgcaggtgcgcaccctcaccggg
gacatccagcagatcccgtcgagcgtcagtgccatcaaggtggacggccggcgggcgcac
gcactgatccgtgccggtgaggagttcgaactcgctccccggtcggtcacggtgtcccgg
ttcgacgtggtcgcgaggcgcaccgagggcccgttcgtcgacctcgacgtcgaggtggaa
tgttcctccggaacctatgttcgggcgctcgcacgtgatctggggatcgcgttgatcggc
gtcggcggacatctcacgtcgctgcgacggacccgggtgggaccgttcaccctcgagcac
gcgcgcacgctggaacagctggccgaggagcccggcgtgagcctcgacatcgattccgcc
gcgcagaccgcgttcccgcaccggcagatcgacgccgacgaggccgaagcgatcagtcag
ggccgctggctcgagccgatcggcatgaagggcgtctacgccgcgatcgatccgagcggg
cacacgatcgcgctgctccaggaacgtgggaagcgggcgagttcggtgatggtggtccgt
cccgcgaccctgaggtag
DBGET
integrated database retrieval system
