Rhodococcus opacus B4: ROP_pKNR-00250
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Entry
ROP_pKNR-00250 CDS
T00882
Name
(GenBank) hypothetical protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rop01002
]
ROP_pKNR-00250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rop01011
]
ROP_pKNR-00250
Peptidases and inhibitors [BR:
rop01002
]
Cysteine peptidases
Family C40
ROP_pKNR-00250
Peptidoglycan biosynthesis and degradation proteins [BR:
rop01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
ROP_pKNR-00250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
NLPC_P60
CHAP
Motif
Other DBs
NCBI-ProteinID:
BAH56117
UniProt:
C1BE77
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All DBs
Position
pKNR:25581..27269
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AA seq
562 aa
AA seq
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MDIKKLVAAAVAAVLGLVLLVVVVASDSGNECPAPATPGGSTAPAGSLVKPTESGTTTLT
SGFGPRWGTEHRGIDFAGEVGTPIYAFTDGRVIAAGPASGFGNWIIVDHQIDGKVVSTVY
GHMFDDGVLVKAGDRVSAGQEIGRIGNAGDTTGAHLHFEVWDGGRLPDGVGTAVDPAPWV
DQAIEPGQAPAPETGEGDGGAPTSPGTSTAPGLAVYNARQLAIAKQAVAIGEAMGVSERG
ITVALATIGRESTFRMLASSVVPESLNYPHDGVGSDNKSVNQYQQQVGIWGTVDELMNPV
TANVKFYQALLQVSGWESMPVTLAAQTVQASAHPEAYAPWEDAAHAMYSEFKGASKELTT
DELSQISSAGRATAVAAGGILPDACPPAGGEHGPLAPGPFGQKVIEAASRWLGTEYAWGG
GDVNGPTRGISDGGGAADAHGDTNKIGFDCSGLTLYAVYQASGGAISLPHFTGDHSNPGQ
LYDARGQDIPFDQKQPGDLIYFGSGGSTHHVGIYHGVTDGQDMLLNAPQSGDVVSIQPLS
NWAGEEMYVRRFGDQPTERQPQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcaagaagctggtcgccgccgccgtggccgccgtgttgggactcgtgctgctg
gtggtcgtcgtcgcctccgacagcggcaacgagtgcccggccccggcgacgcccggcggc
agcacagctcctgccggatcactggtcaaaccgaccgagtccggcaccaccacactgacc
tcgggattcggcccgaggtgggggaccgagcaccggggcatcgacttcgccggcgaggtc
ggcactcccatctacgcgttcaccgacggccgggtcatcgctgccggtcccgcctccgga
ttcgggaactggatcatcgtcgaccatcagatcgacgggaaggtggtttcgaccgtctac
gggcacatgttcgacgacggtgtgctggtcaaggccggtgaccgggtgtccgccggacaa
gagatcggccgtatcggcaacgcgggcgacaccaccggcgcgcacctgcacttcgaggtc
tgggacgggggccgcctcccggacggtgtcggcaccgccgtcgacccggctccctgggtg
gaccaggccatcgagcccggccaggcaccggctcccgagacaggtgagggagacggtggg
gcgccgacctcgcccggcacctctacggcaccggggctcgcggtctacaacgcccgccaa
ctcgcgatcgccaagcaggcggtcgcgatcggggaagcgatgggtgtctccgagcgcggc
atcaccgtcgccctcgccacgatcggccgcgagtcgacgttccggatgctcgccagctcc
gtggtgcccgaatccctgaactacccgcacgacggcgtcggcagcgacaacaagtccgtc
aaccagtaccagcagcaggtcgggatctggggaacggtcgacgagttgatgaacccggtc
accgcgaacgtgaagttctaccaggcccttctgcaggtctccgggtgggagtcgatgccg
gtcaccctcgccgctcagaccgtgcaggcctcggcgcacccggaggcgtacgccccgtgg
gaagacgccgcgcatgccatgtacagcgagttcaagggtgcgagcaaggaactcaccacc
gacgaactgtcgcagatctcctccgccggtagggctacggccgtcgcagcgggaggcatc
ttgcccgatgcgtgcccacccgcaggcggcgagcacggcccgctcgcaccgggcccgttc
gggcagaaggtcatcgaggccgcgtcccgctggctcggcaccgaatacgcctggggcggc
ggtgacgtgaatggccccacccgcgggatcagcgacggcggcggtgcggccgacgcccac
ggggacaccaacaagatcggcttcgactgctccggcctgaccctgtacgccgtctaccag
gcatccgggggtgcgatcagtctgccgcacttcaccggagaccactccaaccccggccag
ctctacgacgctcgcgggcaggacattccgttcgaccagaagcagcccggtgacctgatc
tatttcgggtccggcggcagcacccaccacgtcggcatctaccacggcgtcacagacggc
caggacatgctcctcaacgccccgcaatcaggtgatgtcgtctccatccaaccgctgtcc
aactgggctggcgaagaaatgtacgtccgccgattcggcgaccaacccacagaaaggcaa
ccccagtga
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