Rhodococcus opacus B4: ROP_pROB01-03660
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Entry
ROP_pROB01-03660 CDS
T00882
Name
(GenBank) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rop
Rhodococcus opacus B4
Pathway
rop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ROP_pROB01-03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rop03019
]
ROP_pROB01-03660
03009 Ribosome biogenesis [BR:
rop03009
]
ROP_pROB01-03660
04131 Membrane trafficking [BR:
rop04131
]
ROP_pROB01-03660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rop04147
]
ROP_pROB01-03660
Messenger RNA biogenesis [BR:
rop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ROP_pROB01-03660
Ribosome biogenesis [BR:
rop03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ROP_pROB01-03660
Membrane trafficking [BR:
rop04131
]
SNARE
SNARE associated proteins
Others
ROP_pROB01-03660
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ROP_pROB01-03660
Exosome [BR:
rop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ROP_pROB01-03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
AAA_22
AAA_28
AAA_16
AAA_5
Acetyltransf_6
AAA_14
RuvB_N
TIP49
AAA_18
AAA_33
AAA_17
AAA_lid_3
nSTAND3
RNA_helicase
TsaE
NACHT
AAA_24
SH3_Rv0428c
AAA_11
SKI
FR47
AAA_30
AAA_19
IPT
AAA_2
Mg_chelatase
bpMoxR
IstB_IS21
ABC_tran
Cytidylate_kin
AAA_25
Parvo_NS1
ATPase
KTI12
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BAH55865
UniProt:
C1BDC1
LinkDB
All DBs
Position
pROB01:complement(349917..351179)
Genome browser
AA seq
420 aa
AA seq
DB search
MDAWTIRDFEPEDLEAVVRMDSSSTTTDQLPLFALSDVVGSLLNRHPAVVAVRDGHIIGT
AVARVDEDRAWVMRLSLDPEWRGQGLGSALLSQLEHQLLAKGVRRVSALLPEGETGATAL
SNSGFTTRSGVTYYEKLGTVSPRTAGVLATLGGAVPPAGLWKQVAGMTREKSLIERKIVL
PLSRPALAADHGVAAPRAVVLFGPPGTGKTTFARAIASRLGWPFVELFPSRLAAGENGLA
AGLGEAFASMGELEHVVVFIDEVEEVAARRRPGSQSVGVVNELLKSIVNFRERSGRLLVC
ATNSVRALDDAFLRHGRFDYVLPIGAPDSEARHALWERYLGNEQVDVSALVAATEGYTPA
DVAHAARTVAQATFECSVDSGGRCHAGTQDYLDVIGTVRPTLTAEMMQAFTEDIVGHART
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctggaccatccgagacttcgaacccgaggacctcgaggccgtcgtgcgcatg
gacagcagttccaccaccacggaccaactgcccctgttcgcgctctcggatgtggtcggg
agtctgctgaaccgtcaccccgccgtcgtcgcggtgcgggacgggcacatcatcgggacg
gcagttgctcgcgtcgacgaggaccgcgcctgggtcatgcgcctctccctcgatcccgaa
tggcggggtcaagggctcggcagcgccctgttgtctcagctcgagcaccagctcctcgcc
aaaggagtgcgacgagtgagcgcgctcctccccgaaggtgagacaggtgccaccgcgctg
agcaattccggattcactacccgcagcggagtcacgtactacgagaagctcgggacggtg
tcgccccgcacggccggggtcctggcgactctcggcggtgcggtgccgcccgccggactg
tggaaacaggtcgccggaatgacccgggagaagtcgctgatcgaacgcaagatcgtgctc
ccgctgtcgaggccggcgctggccgccgaccacggggtggcggcaccgcgcgcggtggtg
ctgttcggaccgccgggaaccgggaagacgacgttcgcgcgtgccatcgccagccggctc
ggctggccgttcgtcgaactgttcccatcgcggctcgcggccggcgagaacgggctcgcc
gccggtctcggggaggcgttcgcgtcgatgggtgaactcgagcacgtcgtcgtcttcatc
gacgaggtggaggaggtggcggcccgccgccggcccggttcgcagtccgtcggggtggtg
aacgaactgctgaagtcgatcgtcaacttccgcgaacgcagcggacggttactggtgtgc
gcgaccaattccgttcgagcactggatgatgcattccttcgacacggacgtttcgactat
gtgctgccgatcggggcgcccgactcggaggcccggcacgccctgtgggagcggtacctc
ggcaacgagcaggtcgacgtgtctgccctcgttgcggcgaccgagggctacacgcccgcc
gatgtcgcgcacgcggcacggaccgttgcacaggcgaccttcgagtgcagcgtcgattcg
ggtggacgctgccacgccggcacccaggactacctggacgtgatcggcacggtgcgtccc
accctcaccgccgagatgatgcaggcgttcacggaggacatcgtcggtcacgcccgcacc
tga
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