Rhodococcus opacus B4: ROP_pROB02-00090
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Entry
ROP_pROB02-00090 CDS
T00882
Symbol
vsr
Name
(GenBank) putative DNA mismatch endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rop
Rhodococcus opacus B4
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_pROB02-00090 (vsr)
DNA repair and recombination proteins [BR:
rop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
ROP_pROB02-00090 (vsr)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
BAH47022
UniProt:
C1BDG9
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All DBs
Position
pROB02:11569..11967
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AA seq
132 aa
AA seq
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MATSAGRSRNMQAIRRADTKPEIRLRSALHALGFRYRKDYPIRIDGRLIRPDIVFTRRKV
VVFVDGCFWHSCPEHGRNPAVNERYWSPKLRRNAERDVEQTRLLESAGWRVLRIWEHVPL
DDAVATVTASLT
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacatcggcgggccggtcacgcaacatgcaggccatccggcgcgccgacaccaag
ccagagatccggttgcgatcggccctgcacgcgctcgggttccgataccgcaaggactac
cccatccgcatcgacggcagactgatccgtccggacatcgtgttcacacgccggaaggtc
gtcgtgttcgtcgacgggtgcttctggcattcgtgccccgaacacggtcgcaatcccgcg
gtcaatgagcgttactggtcccccaagctgcgacggaacgccgagcgagatgtggaacag
acccggctcctggagtcggcaggctggcgcgtcctgcggatctgggaacacgtgcccctc
gacgacgcggtcgccacggtcacggcttcactcacctaa
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