Raoultella ornithinolytica B6: RORB6_07000
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Entry
RORB6_07000 CDS
T02625
Name
(GenBank) tonB-dependent receptor yncD
KO
K02014
iron complex outermembrane recepter protein
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ror02000
]
RORB6_07000
Transporters [BR:
ror02000
]
Other transporters
Pores ion channels [TC:
1
]
RORB6_07000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
AGJ86091
LinkDB
All DBs
Position
1562308..1564419
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AA seq
703 aa
AA seq
DB search
MKILSVRTAALPALLFPLIAVAQPGTSDEQTMVVTAAPTAVSELDTPAAVSVVNGDEMRQ
AAPRVNLSESLGAVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGVRGLRIYVDGIPATMPD
GQGQTSNIDIGSVDSLDVLRGPFSALYGNSSGGVINVTTQTGSQPPTIEASSYYGSFGTW
HYGLKATGAVGDGTHAGDVDYTVSTNRFTTHGYRDHSGARKNLANAKLGVRINDVSKLTL
LFNSVDIKANDAGGLTYDEWRNNPRQSPRGDQYNTRKSTKQTQAGLRYERQLSEQDDLSV
MMYAGERETTQYQSIPRAPQLNPSHAGGVIDLTRHYQGIDTRWTHRGELLVPVTFTTGLD
YENMSERRKGFENFVMVNGAPQYGEEGNLRRNERNLMWNIDPYLQTQWQLTDKLSLDAGV
RYSSVWFDSNDYYVTPGNGDDSGDASYHKWLPAGSLKYAVTEAWNVYLSAGRGFETPTIN
ELSYRSDNQSGLNFGLQPATNDTVEIGSKTRIGNGLFTAALFQTNTDNEIVVDASSGGRT
SYKNAGKTRRQGMELGLDQQFGESWRLKAAWTWLDATYRTNVCDDASCNGNRIPGIARNM
GYASFGYQPDRGWYAGSDIRYMSDIMANDENTAKAPSWTVVGLTTGYKWSYGKMDMDLFG
RVDNLFDRSYVGSVIVNESNGRYYEPAPGRNYGVGLNLAWRFE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctttccgtgcgcacggctgcgctacctgccctcctctttccgctgatcgct
gtggcccagcccggcaccagcgatgaacaaactatggttgtgaccgccgcgccgaccgcg
gtctccgagctcgatacccccgccgcggtcagcgtcgttaacggcgatgagatgcgtcag
gcggcgccgcgagtcaatctctctgaatcgctgggcgccgtaccgggactgcaggttcag
aaccgacagaactatgctcaggatctgcagctatcgattcgcggctttggttcccgttcc
acctacggcgtgcgcgggctgcgcatttacgtcgacggtattccggctaccatgcccgat
ggccagggccaaacctcgaatattgatatcggcagcgtcgatagcctcgatgtcctgcgc
ggtccgttctctgcgctgtacggcaactcctccggcggggtgatcaatgtgacgacccaa
accggcagccagccgccaaccatcgaagccagcagctattacggcagcttcggcacctgg
cactatggcctgaaggcgaccggcgccgtcggcgacggaacgcatgccggggacgtcgat
tacaccgtatcgaccaaccgctttactactcacggctaccgcgatcacagcggcgcccgc
aaaaacctggcgaacgccaaactgggcgtgcgcatcaatgacgtcagtaagctgaccctg
ctgtttaacagcgtggatatcaaagccaatgacgccggcggcctgacctacgatgaatgg
cggaataacccgcgtcagtcgccacgcggcgatcagtacaatacccgtaagtcgacgaag
cagacccaggcaggattgcgctacgagcgtcagctcagcgagcaggatgacctgagcgtg
atgatgtacgccggtgaacgtgaaaccacgcaatatcagtcaatcccacgcgcgcctcag
ctcaacccctctcacgcgggcggcgttatcgacctgacgcgccactatcaggggatcgat
acccgctggactcatcgcggcgaactgctggtgccggtcaccttcaccaccggtctcgac
tatgaaaacatgagcgagcggcgcaaagggtttgaaaacttcgtgatggtcaacggcgcg
ccgcagtacggcgaagaggggaacctgcgccgtaatgaacgtaatctgatgtggaacatc
gacccgtatctgcagacccagtggcagctgacggacaaactctccctcgatgccggcgtg
cgctacagttcggtatggtttgactccaacgattattacgttaccccgggtaacggcgat
gacagcggcgacgccagctaccataaatggctgccggccggctcgttaaagtatgcggtc
accgaggcgtggaacgtctatctctccgccgggcgcggctttgagacgcccaccattaac
gaactctcctaccgttccgataaccagagcggtctgaacttcggcctgcagcctgcgact
aacgacacggtcgagatcggcagtaagacgcggatcggcaatggcctgtttaccgccgcg
ttgttccagaccaacaccgataacgagatcgtggtggatgccagcagcggcggccgtacc
agctacaaaaacgccggcaaaacccgtcgtcaggggatggagctggggctggatcagcag
tttggcgaaagctggcgtctgaaagccgcatggacctggctggatgcgacctaccggacc
aatgtctgcgatgacgccagctgcaacggcaaccgtattccgggcatcgcgcgcaatatg
ggctacgcctcgttcggctatcagccggatcgcggctggtacgccggcagcgatattcgc
tatatgagcgatatcatggctaacgacgagaacaccgcaaaagccccgtcctggacggtg
gtcggtctcaccaccggttataagtggagctatggcaagatggacatggatctgtttggc
cgcgtcgataacctcttcgatcgcagctacgtcggctcggtgattgtcaacgagtccaac
ggtcgttactacgaacccgcgccgggacgtaactatggcgtcggcctgaatctcgcctgg
cgttttgagtaa
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