Raoultella ornithinolytica B6: RORB6_08565
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Entry
RORB6_08565 CDS
T02625
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RORB6_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ror03400
]
RORB6_08565
Enzymes [BR:
ror01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RORB6_08565
DNA repair and recombination proteins [BR:
ror03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RORB6_08565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
AGJ86402
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All DBs
Position
1896975..1897781
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AA seq
268 aa
AA seq
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MKFLSFNINGLRARPHQLAAIVDKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK
GHYGVALLTKETPVAVRRGFPNDGEEAQRRIIMAEIPSAFGNVTVINGYFPQGESRDHET
KFPAKAAFYQNLQNYLDSELNKDNPLLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL
PEEREWMARLLDWGLVDTWRQANPDNQDRFSWFDYRSKGFDDNRGLRIDLLLASSPLAQR
CVETGIDYDIRGMEKPSDHAPVWATFKP
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctctcttttaatatcaacggcctgcgtgcccgcccccaccagctggccgcc
atcgtcgacaaacatcagcctgacgtcattggcttacaagaaaccaaagtacacgacgac
atgtttccgctcgaagaggttgcaaagctcgggtacaacgtgttctaccacggtcaaaaa
gggcactatggcgtggcgctgctgaccaaagagacgccggtcgccgtacgccgcggtttc
cccaacgatggcgaagaggcccagcgccgcatcatcatggcggaaattccgtcggcattc
gggaatgtcacggtgatcaacggctacttcccgcagggcgaaagccgcgaccacgaaacc
aagttcccggcaaaagcggcgttctaccagaacctgcaaaactatcttgatagcgaactg
aacaaagataatccgctgctgatcatgggcgatatgaacatcagcccaaccgaccttgac
atcggcattggcgaagagaaccgcaagcgctggctgcgcaccggtaagtgctcattcctg
ccggaagagcgcgagtggatggcgcgtttgctggactggggtctggttgacacctggcgt
caggccaacccggacaaccaggatcgcttctcctggtttgactaccgctccaaaggcttt
gacgataaccgcggtctgcgtatcgacctgctgctggcaagctctccgctggcgcagcgc
tgcgtagaaaccggtattgattacgacattcgcggtatggaaaaaccgtctgaccatgcg
ccggtctgggccaccttcaaaccgtaa
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