KEGG   Raoultella ornithinolytica B6: RORB6_09870
Entry
RORB6_09870       CDS       T02625                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ror  Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:ror00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ror03400]
    RORB6_09870 (helD)
Enzymes [BR:ror01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RORB6_09870 (helD)
DNA repair and recombination proteins [BR:ror03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RORB6_09870 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 ResIII DEAD
Other DBs
NCBI-ProteinID: AGJ86660
LinkDB
Position
complement(2173920..2175974)
AA seq 684 aa
MELKATTLGKRMAQHPYDRVQLLNAGVKVSGDNHEYLIPFNQLLSVQCKRGLVWGELEFV
LPDSKVVRLHGTEWNETQRFYHHLNTLWQQWSAEMSGIAAGVLQQQLEEVARASAEGKWL
TRQQVTDIQVKIRRALTGLPMPTSRLDAFENCRELWRQCQSWLADTEEARLAHNQAFTES
MLEQYHGFFASVETSPLNPAQARAVVNGERALLVLAGAGSGKTSVLVARAGWLLTRGEAA
ADQILLLAFGRQAAQEMDERIRERLGSEEIAARTFHSLALHIIQQGSKKVPTISKLESDS
TARQTLLLKNWRQQCQEKKAQAKGWRQWLEEEMGWQVPDGEFWQDKKIQRRMASRLDRWV
SLMRMHGGSQAEMIAGAPEEVRDLFGKRVKLMAPLLKAWKTALKDEGAVDFSGLIHQAIN
ILDKGRFVSPWKHILVDEFQDISPQRAALLAALRRQNTQATLFAVGDDWQAIYRFSGAQL
SLTTAFNHYFGEGDCCALDTTYRFNGRIGEVANGFIQQNPHQLSKPLNSLTTGDKKAVTL
LADDKLDDLLDKLSGYAKPDQRILLLARYHHLKPEALEKAATRWPHLQLDFMTIHASKGQ
QADYVIVLGLQEGDDAFPAPARESIMEQALLPQPEDFPDAEERRLLYVAITRARLRVWLL
FNKARPSPFVEMLEDLDVPVERKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacaacattgggcaaacgtatggcacagcatccctacgaccgggtg
caactgcttaacgcgggagtaaaagtctcgggtgataaccatgagtatcttatccctttc
aatcagttattgtcagttcaatgtaagcgcggcctggtctggggcgaactggagttcgtt
ttaccggacagcaaagtcgtgcgtttacacggtaccgagtggaatgaaacgcagcgtttt
tatcatcatctgaataccctctggcagcagtggagcgcggaaatgagcggtattgccgcc
ggtgttctccagcagcagctggaggaggttgcccgcgccagcgccgaaggcaagtggcta
acccgtcagcaggttactgatattcaggtgaagattcgtcgtgcgttgaccggtctgccg
atgccgaccagccgtcttgacgctttcgagaactgtcgtgagctgtggcggcagtgccaa
agctggctggctgataccgaagaggcccggctggctcataatcaggcttttaccgaatcg
atgctcgagcagtatcacggattttttgccagcgtcgaaacttctccgctgaatcccgcg
caggcgcgggcggtggtcaacggcgagcgcgctttgttggtgcttgccggggccggaagc
ggcaaaacctccgtgctggtggcgcgagccgggtggttattaacgcggggagaagccgcc
gccgatcagattctgctgctggcatttggccgccaggcggcgcaggaaatggatgagcgt
attcgtgaacgtctgggttcagaagagatcgcggctcgtacctttcactctctggcatta
catattattcagcagggcagcaaaaaagtgccgaccatcagcaagctggagagcgacagc
acggcccgccagaccttgctgctgaaaaactggcgccagcagtgccaggagaaaaaagcg
caggccaaggggtggcggcagtggctggaggaagagatgggctggcaggtgccggacggc
gaattctggcaggataaaaaaatccagcggcgaatggccagtcgcctcgatcgctgggtt
agcctgatgcgcatgcacgggggatcgcaggcggagatgatcgccggcgcgccggaagag
gtgcgcgacctgttcggcaagcgcgttaagctgatggcgccgctgttaaaagcgtggaaa
acggcgctgaaagacgaaggcgcggtcgatttttccgggctgatacatcaggcgattaat
attctggataaagggcgcttcgtcagcccgtggaaacatattctggtcgacgagtttcag
gatatctcgccgcagcgcgccgccttgcttgctgcgctgcgtcggcagaacacgcaggcg
acgttatttgccgttggcgatgactggcaggctatctatcgcttcagcggggctcaactc
tctttgaccaccgcattcaatcactattttggcgaaggcgattgctgtgcgctggatacc
acctaccggtttaacgggcgtattggggaggtggcgaacggttttatacaacaaaacccg
catcagttgagtaaaccattgaacagcctgacgaccggagacaagaaagccgtgacgctg
ctggcggacgataagctcgacgatctcctcgataaactcagcggctatgcgaaaccggac
cagcggattttattgctggcgcgctatcatcatttgaaacccgaggcgctggaaaaagcg
gcgacgcgctggccgcatctgcagctcgattttatgaccattcatgccagtaaaggccag
caggcggattatgtcattgtgttggggctgcaggagggggacgatgcgtttccggccccg
gcgcgcgaatccattatggagcaggcgctactgccgcagccggaggattttccggatgcg
gaagagcggcgcttgctctatgtcgctattacgcgtgcgcggcttcgcgtctggctgttg
ttcaacaaagcgcggccttcgccgtttgtcgaaatgttagaagatctggatgtgccggtg
gagagaaaaccgtaa

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