Raoultella ornithinolytica B6: RORB6_11070
Help
Entry
RORB6_11070 CDS
T02625
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RORB6_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ror03019
]
RORB6_11070
Enzymes [BR:
ror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RORB6_11070
Messenger RNA biogenesis [BR:
ror03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RORB6_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AGJ86898
LinkDB
All DBs
Position
complement(2421753..2423153)
Genome browser
AA seq
466 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYLEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QHLIQKEPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRSGVDVLVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLHDI
ERLLKKEIPRIAIDGYAPDPSIRAEPIQNGRQQRSGGGGRGQSQGRSGQGQGRNAQGQGR
SQQSAPRRNDGEAPKAGAKPSRRIGEAKPAGEQQRRRRPRKPAAAE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaaccctgatatcctgcgcgctgtcgccgagcagggt
taccttgagccaaccccaattcagcagcaggctatccctgcggtgttgcagggacgcgat
ctgatggccagcgcccagaccggcaccggcaaaacggcgggctttaccctgccgctcctg
cagcatctgattcagaaagagccgcatgctaaaggccgtcgcccggtgcgcgcgctgatc
ctcacgccaacgcgtgaactggcggcacagatcggtgaaaacgttcgcgattacagcaaa
tacctgaatattcgctcgctggtggtttttggcggggtgagtattaacccgcagatgatg
aagctgcgcagcggcgtcgatgttctggtggccacccctgggcgcctgctggatcttgaa
catcagaatgccgtcagcctggacaaggttgaaatcctggtgcttgatgaagccgaccgt
atgctggatatgggctttattcatgatattcgccgcgtgctggcgaagctcccggcgaaa
cgccagaatctgctgttctccgcgaccttctcggacgacatcaaggcgctggcggaaaag
ctgctgcataacccgctggaaatcgaagtggctcgccgtaataccgcttccgagcaggtg
acgcagcacgtccatttcgttgataagaaacgtaagcgggaactgctgtcgcagatgatc
ggtgaaggtaactggcagcaggtgctggtctttacccgcaccaaacatggcgccaaccac
ctggccgagcagctgaataaagacggcatccgcagcgccgctattcatggcaacaagagc
cagggggcgcgtacccgggcattagccgacttcaaatccggtggtattcgcgtgctggta
gcgacggatatcgcggcgcgtgggctggatatcgaagagctgccgcacgtcgtcaactac
gagctgcctaacgtgccggaagattacgttcaccgtatcggccgtaccggtcgcgcagcc
gccaccggcgaagcgctgtcgctggtctgcgtggacgagcataaactgctgcatgatatc
gaacgcctgctgaaaaaagagattccccgtatcgctattgatggctatgcgccggatccg
tctatcagagcggagccgattcaaaacggtcgccagcagcgtagcggtggcggcggtcgc
ggccagagccagggccgcagcggtcagggacaaggacgtaacgcccaggggcagggtcgc
agccagcagtctgcgccgcggcgtaacgatggcgaagcgccgaaagccggggcaaaacct
tcacgtcgtatcggcgaggcgaaaccggccggcgagcaacagcgccgtcgtcgcccgcgt
aaaccagcggcagctgagtaa
DBGET
integrated database retrieval system
