Klebsiella ornithinolytica B6: RORB6_11175
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Entry
RORB6_11175 CDS
T02625
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ror
Klebsiella ornithinolytica B6
Pathway
ror03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RORB6_11175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ror03400
]
RORB6_11175
DNA repair and recombination proteins [BR:
ror03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RORB6_11175
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RORB6_11175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGJ86919
LinkDB
All DBs
Position
complement(2441554..2443575)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKTFTLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTTGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGQVESTIPR
YTIYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGPYELDKSGDEVVDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMAKAISETERRREKQQRYNEEHGITPQGLNKKVVDILQLG
SNLAKTKAKGRGKSRSPVEADTPEVLLTPKALQQRIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgttcacgctgcattccgcattccgtccttctggcgaccagccggaggct
atccgccgcctggaagaggggctggaagatggcctggcgcaccaaacgctgctgggggtg
accgggtcgggcaagacgttcaccattgctaacgttatcgccgatcttcagcgtccgacg
atggtgctggcgccgaataagaccctggcagcacagctgtacggcgaaatgaaagagttc
ttcccggacaatgcggtggaatatttcgtctcctactacgattactatcagcctgaagcc
tacgtgccgagctcggacaccttcatcgagaaagacgcgtcggtgaacgagcatatcgag
cagatgcgtctgtcggcgaccaaagcgctgcttgagcggcgcgatgtggtggtagtggct
tcggtatcggctatctacggtctgggcgacccggatctctacctgaagatgatgctgcac
ctgaccaccggcatgctgatcgaccagcgggcgattttacgccgcctggcggagctgcag
tatacccgtaacgatcaggccttccagcgcggcaccttccgcgtgcgcggcgaagtgatc
gacgtcttcccggcggaatccgacgatattgcgctgcgtatcgagctgttcgatgaagag
gttgagcggctgtcgctgttcgatccgctcaccggtcaggtggaatcgacgattccacgc
tataccatctacccgaaaacgcactacgtgacgccacgcgagcgaatcgttcaggcgatg
gaagagataaaagtcgagctggcggagcggcgtaaagtgctgctggaaaacaacaagctg
ctggaagagcagcgcctgagccagcgtacccagttcgacctcgaaatgatgaacgagctg
ggctactgctcgggcatcgaaaactactcgcgctatctttccgggcgcgggccgggcgaa
ccgccgccgacgctgtttgattacctgccggcagacggtttgctggtgattgacgaatcc
cacgtcactattccgcaaatcggcggcatgtaccgcggcgatcgggcgcgcaaagagacg
ctggtggagtacggcttccgtctgccgtcggcgctggataaccgtccgctgaagttcgaa
gagtttgaggcgctggcgccgcagaccatttacgtctcggcgacgccggggccttatgag
ctggataaatctggcgatgaggtggtcgatcaggtggtacgtccgaccgggctgcttgac
ccgctgattgaagtgcggccggtggcgactcaggtcgatgacctgctgtcggagattcgc
atccgcgtcgccatcaacgagcgcgtgctggtcaccactttgaccaaacggatggcggaa
gatttaacggagtatctcgaagagcacggcgagcgcgtgcgctacctgcactccgatatc
gataccgtggagcgtatggagatcatccgcgacctgcggctgggcgagttcgatgttctg
gtgggtatcaacctgctgcgtgaggggctggatatgccggaagtgtcgctggtggcaatt
ctggatgccgataaagagggcttcctgcgttcggaacgctcgctgattcagaccatcggt
cgcgccgcgcgtaatatcaacggtaaagcgattctgtatggcgataaaattaccgcttcg
atggccaaagccatcagcgagaccgagcgtcgccgtgagaagcagcagcgctataacgaa
gagcacggtatcaccccgcaggggctgaataaaaaagtggtcgatattctgcagctgggc
agcaatctggcgaagacgaaagccaagggccgcggaaaatcacgttcgccggttgaggcg
gatacgcctgaggtgctgctgacgccaaaagcgctgcagcagagaattcacgagctggaa
gggcagatgatgcaacatgcgcagaatctggagttcgaagaagccgcgcaaattcgtgac
cagctgcatcagctccgcgagctgtttattgcggcgtcctga
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