Raoultella ornithinolytica B6: RORB6_11445
Help
Entry
RORB6_11445 CDS
T02625
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00020
Citrate cycle (TCA cycle)
ror00190
Oxidative phosphorylation
ror00650
Butanoate metabolism
ror00720
Other carbon fixation pathways
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01120
Microbial metabolism in diverse environments
ror01200
Carbon metabolism
Module
ror_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ror_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ror_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RORB6_11445 (sdhB)
00650 Butanoate metabolism
RORB6_11445 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RORB6_11445 (sdhB)
00720 Other carbon fixation pathways
RORB6_11445 (sdhB)
Enzymes [BR:
ror01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RORB6_11445 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer4_7
Fer4_18
Fer4_9
Fer4
Motif
Other DBs
NCBI-ProteinID:
AGJ86973
LinkDB
All DBs
Position
complement(2500763..2501479)
Genome browser
AA seq
238 aa
AA seq
DB search
MKLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALMQLKEKDPSLSFRRSCREGVC
GSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPY
LLNNGQNPPAREHLQKPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYR
FLIDSRDTETDSRLEGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRSA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagagttttcaatttatcgttataacccggacgttgacgatgctccgcgcatg
caggattacaccctcgaagcggaagaaggtcgtgacatgatgctgctggatgccctgatg
cagctgaaagaaaaagacccgtcgctctcatttcgtcgttcctgccgtgaaggggtctgt
ggctccgacggtctgaacatgaacggtaagaacggtctggcgtgtatcacgccgatctcc
gcgctgaatcagccgggtaagaaaattgtcatccgtccgctgcccggtttgccggttatc
cgcgatttggttgtagacatggggcaattctatgcacaatatgagaagattaagccttac
ttgttgaataatgggcaaaatcctccggctcgcgagcatctgcagaagccagagcagcgc
gaaaaactcgatggtctgtacgagtgtattctttgcgcatgttgttcaacctcttgtccg
tcgttctggtggaatccggacaagtttatcggcccggcaggtctgctggctgcgtatcgt
ttcctgattgacagccgcgataccgaaaccgacagccgtctggaagggttaagcgatgct
ttcagcgtattccgctgtcacagcatcatgaactgcgtcagtgtatgtccgaaagggctt
aacccgacgcgcgccatcggccatattaagtcgatgctgctgcagcgcagtgcgtaa
DBGET
integrated database retrieval system