Raoultella ornithinolytica B6: RORB6_11450
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Entry
RORB6_11450 CDS
T02625
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00020
Citrate cycle (TCA cycle)
ror00190
Oxidative phosphorylation
ror00650
Butanoate metabolism
ror00720
Other carbon fixation pathways
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01120
Microbial metabolism in diverse environments
ror01200
Carbon metabolism
Module
ror_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ror_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ror_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RORB6_11450 (sdhA)
00650 Butanoate metabolism
RORB6_11450 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RORB6_11450 (sdhA)
00720 Other carbon fixation pathways
RORB6_11450 (sdhA)
Enzymes [BR:
ror01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RORB6_11450 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
GIDA
Pyr_redox_2
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AGJ86974
LinkDB
All DBs
Position
complement(2501495..2503261)
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AA seq
588 aa
AA seq
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MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNT
HEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELDHMGLPFSRLENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYALDLVKNADGAVVGC
TALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHINTGDGVGMAIRAGVPVQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERYAPNAKDLAGRDVVARSIMIEIREG
RGCDGPWGPHAKLKLDHLGKEVLESRLPGILELSRTFAHVDPVKEPIPVIPTCHYMMGGI
PTKVTGQALTVNEQGEDVVIPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAVGLHLQ
ESIAEQGDLLDATEAEIDASLERLNRWNGNRNGEDPVEIRKALQECMQHNFSVFREGDAM
AKGLEQLKAIRERLKNARLDDTSSEFNTQRVECLELDNLMETAYATAVSANFRTESRGAH
SRFDFPDRDDENWLCHSLYLPESESMTRRSVNMEPKLRPAFPPKIRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcctgtcagagaatttgatgcagttgtgattggtgccggtggcgcaggtatg
cgcgcggcgctgcaaatttcccagagcggccagacctgtgcgctgctctctaaagtgttc
cctacccgttcccataccgtttccgcgcagggtggcatcaccgtggcgctcggtaatacc
catgaagataactgggaatggcatatgtatgacacggtgaaaggctccgattatatcggt
gaccaggacgccatcgaatatatgtgtaagaccggcccggaagcgattctggagcttgac
catatggggctgccgttctcccgcctggagaatggcaccatttatcagcgtccgtttggc
ggccagtcgaaaaacttcggcggcgaacaggcggcacgtaccgctgcggcggctgaccgt
accggtcacgcgctgctgcataccctttatcagcagaacctgaaaaaccacaccaccatt
ttctccgagtggtatgcgctggatctggtgaaaaacgccgatggtgcggtggtaggttgt
accgcgctgtgtatcgagaccggtgaagtggtttacttcaaagcccgtgcgaccgtgctg
gcaaccggcggcgcaggccgtatctaccagtccacaactaacgcccatatcaacaccggt
gacggcgtcgggatggcgattcgcgccggcgtgccggtgcaggatatggaaatgtggcaa
ttccacccgaccggtatcgccggtgcgggggttctggtgacagaaggctgccgcggtgaa
ggcggttatctgctgaacaaacacggcgagcgctttatggagcgttatgccccgaatgcg
aaagacctggcgggtcgtgacgtggtggcgcgttccatcatgatcgaaatccgtgaaggt
cgcggctgtgacggcccgtggggcccgcatgcgaagctgaaactggaccacctggggaaa
gaggttctggaatcccgtctgccgggtatcctggagctttcacgtaccttcgcccacgtc
gacccggtgaaagagccgattccggttatcccaacctgccactacatgatgggcggtatt
ccgaccaaagtgaccggtcaggcgctgaccgtgaacgagcagggcgaagacgtggtgatt
cctggcctgttcgccgtcggcgaaattgcctgcgtatcggtccacggcgcgaaccgtctg
ggcggcaactccctccttgacctggtggtgttcggtcgtgcggtcggtctgcatctgcag
gagtcgattgccgagcagggcgatctgcttgacgcgaccgaagccgaaatcgacgcgtcc
cttgaacgtctgaaccgctggaacggtaaccgtaacggcgaagatccggtggaaatccgc
aaagcgctgcaagagtgtatgcagcataacttctcggtattccgcgaaggcgatgcgatg
gccaaagggcttgagcagctgaaagcgatccgcgagcgcctgaaaaatgcgcgcctggat
gacacctccagcgagttcaacacccagcgcgttgagtgcctggagctggataacctgatg
gaaactgcctatgccaccgcggtttctgcaaacttccgtaccgaaagccgcggcgcgcat
agccgcttcgacttcccggatcgtgatgacgaaaactggctgtgccattccctgtatctg
ccagagtcggaatccatgacgcgtcgtagcgtcaatatggaaccgaaactgcgtccggca
ttcccgccgaagattcgtacttattaa
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