Raoultella ornithinolytica B6: RORB6_12965
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Entry
RORB6_12965 CDS
T02625
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror03030
DNA replication
ror03430
Mismatch repair
ror03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RORB6_12965
03430 Mismatch repair
RORB6_12965
03440 Homologous recombination
RORB6_12965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ror03032
]
RORB6_12965
03400 DNA repair and recombination proteins [BR:
ror03400
]
RORB6_12965
Enzymes [BR:
ror01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RORB6_12965
DNA replication proteins [BR:
ror03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RORB6_12965
DNA repair and recombination proteins [BR:
ror03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RORB6_12965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
AAA_16
ResIII
AAA_2
AAA_14
AAA_30
AAA_assoc_2
AAA_7
PIF1
DENN
TsaE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGJ87274
LinkDB
All DBs
Position
complement(2842696..2844606)
Genome browser
AA seq
636 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILGEEQITFESRALQLLSRAADGSLRDALSLTDQAIASGDGRLTAESVSTM
LGTLDDDQALSLIEALVAADGERVMAGVNEAASRGVEWEALLVEMQSLLHRIAMVQLSPS
ALGADMAAVELRMRELARTVPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PQAPLPEPEVKPQPATLAAPVQAAPVSASPVPPPQNLPQTTSQVLAARSQLQRSQGAPTP
KKSEPAAASRARPVNNAALERLSSITERVQARPAVAAVQEKVPAKKEAYRWKATTMVETV
KEEVATPKALKKALEHEKTPELAAKLALEAVERDGWAAEVNQLAVPKLVEQVALNAWKEQ
DGNCICLHLRPSQRHLNSAGAQQKLAEALGVLYGSPVELTIVEDDNPAMRTPLEWRQAIY
EEKLAQAREAIIADNNIQTLRRFFDADLDEESIRPI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgtaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttatcgttagggcgcattcatcacgct
tatctcttttccggcacccgcggcgtggggaaaacctccatcgcacgtttgctcgcaaaa
gggttgaactgtgaaaccggtattaccgccacgccgtgcggcgtgtgtgataactgccgc
gaaatagagcaggggcgctttgtcgatctgattgagattgatgccgcttcccgtaccaaa
gtcgaagacacccgcgacctgctggacaacgtccagtacgcgccggcccgtggccgcttt
aaggtctatctgatcgatgaagtccacatgctgtcacgccatagcttcaacgcgttgtta
aaaacgctggaggagccgcctgcgcacgtcaaattcctgctggcgaccaccgatccgcag
aagctgccggtgacgatcctgtcgcgctgtctgcagttccatctcaaggcgctggatgtc
gaacagatccgccatcagcttgagcatattctcggcgaagagcagattacctttgaatcc
cgcgcgctgcagctgctgtcgcgcgcggcggacggcagtctgcgcgatgccttaagcctg
accgatcaggcgattgccagcggcgatggtcgtttgacggcggagtcggtcagtaccatg
ctcggcacgctcgacgacgatcaggcgctgtcattgattgaggcgctggtggcagccgat
ggcgaacgcgtcatggcgggcgttaacgaagcggcctcccgcggcgttgagtgggaagcg
ctgctggttgaaatgcagagtctgctgcaccggattgcgatggtccagctctctccttcg
gcgctgggcgccgatatggccgcggtagagctgcgtatgcgtgaacttgcgcgcaccgtg
ccgcccaccgatatacaattgtactatcagacgctcctgattggccgcaaagagctgccg
tatgcgccggatcggcgcatgggtgtggaaatgacgctgctgcgtgcgctggcattccat
ccgcaagcgccgctgccggaaccggaggtgaagccgcaaccggcaacgctggctgcgcct
gtacaggcggcgccggtatccgcttcgccggtgccgccgccgcagaatctgccgcaaacc
accagtcaggtactggcggcacgcagccagctgcagcgtagccagggagcgcccacccca
aaaaagagtgaaccggcagccgcatcccgcgcgcggccggtgaataacgctgcgctggag
cgactgagttcaataaccgagcgcgtgcaggctcgcccggccgtcgcagcggtgcaggaa
aaggttccggccaaaaaagaagcctatcgctggaaagcgacgacgatggtcgaaacggtg
aaagaagaggtcgcgacgccgaaggcgctgaagaaagcgctggagcatgaaaaaacgccg
gagctggcggcaaaactggcgctggaagcggtcgaacgcgacggctgggcggcagaggtt
aatcagctggcggtgccgaagctggtagagcaggtggcgctgaatgcgtggaaagagcag
gacggtaattgtatctgtctgcatctgcgcccgagccagcggcatcttaattccgccggc
gcgcagcaaaagttggccgaagcgctcggcgtgttgtacggttcaccggttgaattgacc
atcgtggaagacgataatcctgcgatgcgcacgccgctggagtggcggcaggcaatttat
gaagagaagctcgcgcaagcgcgcgaagcgattattgcggataacaacattcagacgctg
cgccggttcttcgatgcggatctggatgaagagagtattcgccccatttga
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