Raoultella ornithinolytica B6: RORB6_14180
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Entry
RORB6_14180 CDS
T02625
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00310
Lysine degradation
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
RORB6_14180
Enzymes [BR:
ror01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
RORB6_14180
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
PKcGMP_CC
Motif
Other DBs
NCBI-ProteinID:
AGJ87517
LinkDB
All DBs
Position
complement(3101056..3103212)
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AA seq
718 aa
AA seq
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MNIIAIMGPHGVYHKDEPIKELEAALQRQGFQTIWPQNSADLLQFIEHNPRICGVIFDWD
EYNADLCSDINQLNEYLPLYAFINAHSTMDVSSQDLRMTLWFFEYALGLAEEIATRIAQY
TREYLDNITPPFTKALFNYVQEGKYTFCTPGHMGGSAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARAFGAEQSYMVTNGTSTSNKIVGMYSAPAGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPKREFTRDSIQQKVNTTGGAGWPVH
AVITNSTYDGLLYNTTWIKETLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGDRIPGKVVF
ETQSTHKMLAALSQASLIHIKGSYDEETFNEAFMMHTSTSPSYPIVASIETAAAMLRGNS
GKRLIQRSIERALDFRKEVQRLREETDGWFFDIWQPENIEQVQCWPVAGGENWHGFKDAD
DNHMFLDPVKVTILTPGMDEQGNMDDEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIG
IDKTRAMGLLRGLTEFKRAYDLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHRLIRQH
QLSQLMLSAFDVLPEMKMTPHQAWQRQIKGEVETIELENLVGRISANMILPYPPGVPLLM
PGEMITEESRAVLDFLLMLCSIGRHYPGFETDIHGAKRDDDGVYRVRVLKNDSLLAPR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatcatcgccatcatggggccccacggcgtctaccacaaagacgaaccgatcaaa
gagctggaagcggccctgcaacggcaaggctttcagactatctggccgcaaaacagcgcc
gacctgctgcagtttattgaacataacccgcggatctgcggggtcatctttgactgggat
gagtacaacgccgatctgtgcagcgatatcaatcagctgaatgagtatctcccgctatac
gccttcatcaacgcgcattcgacgatggatgtcagcagccaggatctgcgtatgacgctg
tggttctttgaatacgcgcttggcctggcagaagagatcgccacccgaatcgcccagtac
acgcgcgaatacctggataacattaccccgccgtttaccaaagccctgttcaactatgtg
caggagggaaaatataccttctgtacgccggggcatatggggggaagcgcgtaccagaaa
agcccggttggctgcctgttttatgactttttcggtggcaatacgctgaaagccgacgtg
tcgatttcggtcaccgagctggggtcgctcctcgatcacaccggcccgcatctcgaagcc
gaggagtatatcgcccgcgcctttggtgccgagcagagctacatggtgacgaacggcacc
tcgacgtcgaacaaaattgtcggcatgtattcggcaccggcgggcagcacgctgctgatt
gaccgtaactgccataagtcactggcgcacctgctgatgatgagcgatgtcgtgccgctg
tggctgaaaccgacgcgtaacgcgctgggtattctgggcggcataccgaaacgcgaattt
acccgcgacagcattcagcagaaggtgaataccacgggtggcgccgggtggccggtacat
gcggtgattaccaactccacctatgacgggctgctgtataacaccacctggatcaaagag
acgctcgatgtgccctcgatccattttgactcggcctgggtgccttacactcatttccat
ccgatctaccaggggaaaagcgggatgagcggcgatcgcattccgggtaaggtcgtcttc
gaaacacaatcaacgcacaaaatgctggccgcgctgtcgcaggcctcgcttatccacatt
aaaggcagctacgacgaagagacctttaatgaagcgtttatgatgcacacctcgacgtcg
ccgagctatccgatcgttgcttcgatagaaaccgcggcggccatgctgcgcggcaattct
ggcaagcgtttgatccaacgctccattgagcgagcgctggatttccgcaaagaggtccag
cgtctgcgcgaagagactgacggctggttctttgatatctggcagccggagaatatcgag
caggtgcagtgctggccggtggcaggcggtgagaactggcacggttttaaagatgctgac
gataaccatatgttcctcgacccggtgaaggtgacgatcctgacgccgggaatggatgaa
cagggcaatatggacgatgaggggatcccggcggcgctggtggcgaaattcctcgatgag
cgcggcgtggtagtggagaaaacgggtccctacaacctgctgttcctgttcagtattggt
attgataaaacccgggcgatggggttgttacgtggcttaaccgagtttaagcgcgcctac
gatctcaacctgcgagtgaagaacatgctgccggatctctacgcggaagatcccgatttt
tatcgcaatatgcgtattcaggatctggcgcaggggatccatcgcctgatccgccagcac
cagttgtcgcagctgatgctgagcgcgtttgacgtgctgccggaaatgaaaatgacgccg
catcaggcctggcagcggcaaatcaaaggtgaagtcgaaaccattgagctggaaaatctg
gtcgggcgcatttcggctaatatgattctgccgtacccgccgggcgtaccgctgttgatg
cccggagagatgattaccgaagagagccgggcggtgctcgatttcctgctgatgctgtgc
tcgattgggcgccattatccgggctttgaaacggatatccacggggcgaagcgcgatgac
gacggcgtctaccgggtacgagtcttaaaaaatgactcactgcttgcgccgcgctaa
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