Raoultella ornithinolytica B6: RORB6_14445
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Entry
RORB6_14445 CDS
T02625
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ror03016
]
RORB6_14445
Enzymes [BR:
ror01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RORB6_14445
Transfer RNA biogenesis [BR:
ror03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RORB6_14445
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGJ87570
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All DBs
Position
3166814..3167350
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AA seq
178 aa
AA seq
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MSEPKRLFFALELPAEAQRQIVHWRAANFAEDAGRPVAADNLHLTLAFLGEVSADKQRAL
AALAGRIRQPGFTLTLDDAGQWLRSRVVWLGTRRPPRGLLQLASMLRAQAARSGCYQSPQ
PFHPHITLLREARHAVPIPPPGFSWTFAVSEFVLYESRFSRGRTRYTALERYPFNKES
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagccgaaaaggctgtttttcgcccttgagctgcctgctgaagcccagcggcaa
atcgttcactggcgcgcggcgaactttgcggaagatgccggacggccggtggccgcagat
aacctgcacctgacgctggcctttcttggcgaagtcagcgcggacaagcagcgtgcgctg
gcggcgctggccggacgcatccgccagcccggatttacgctcaccctcgacgatgccggc
cagtggctgcgttcccgcgtggtgtggctcggcacccgccggcctccgcgcggcctgcta
cagctggccagcatgctgcgcgcccaggcggcacgcagcggttgctatcaaagcccgcag
ccgtttcatccgcatatcaccctgctgcgcgaggcccgccacgcggtgcccattcccccc
ccaggcttcagctggacttttgccgtcagtgagtttgtgctttatgaatcccgtttttcc
cgcggacgcacccgctataccgcgctggaacgttatcccttcaacaaggaaagctga
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