Raoultella ornithinolytica B6: RORB6_16030
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Entry
RORB6_16030 CDS
T02625
Name
(GenBank) beta-1,4-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00520
Amino sugar and nucleotide sugar metabolism
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RORB6_16030
Enzymes [BR:
ror01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
RORB6_16030
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
AGJ87887
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Position
3515387..3517066
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AA seq
559 aa
AA seq
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MSLIQNPVLPGFNADPSIIRVGDTYYIANSTFEWFPGVRLHESKDLQHWNLLPSPLSTTT
LLDMKGNPSSGGIWAPALSYADGQFWLVYTDVKITEGAFKDMTNYLTTATDIRGPWTDPV
KLNGVGFDASLFHDDDGRKYIVQQTWDHREYHHPFDGITLTELDTRTLKLKPATARTIYR
GTAVALVEGPHLYKLNGYYYLFAAQGGTVFTHQEVVARSKTLEANSFETEPGEVFLTNVD
TPDSYIQKQGHGALVSTPKGEWYYASLCARPWNRPGESAYDPRGWSTLGRETAIQKVYWD
ADGWPRIEGGHGGKTFVEGPTDAIYTESAKDHSQYDAFKTVTLDPNWNTLRVPFTEKMGT
TGDGKLTLIGQGSLANTHNLSLIARRWQAFYFDAQVKVKFNPFNYQQMAGLTNYYNDRHW
SFVFITWNEINGSVIEIGENNRGKYTSYLKDDAIKIPEGTEFVWFRSKVRKQTYSYEYSF
DGVNFTEIPVKLDAAILSDDYVLQSYGGFFTGAFVGLAAVDYSGYDASAEFYDFHYQELG
DALMADGTYSWQASESRFN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttattcaaaaccctgtattacccggatttaatgcggatcccagtattatccgt
gttggggacacctactatatcgccaactcgacatttgagtggttccctggcgttcgtttg
catgagtcaaaggacctgcaacactggaatctgctccctagtcccttgtcgacgacgacc
cttttagatatgaaaggcaatccttcatcaggtgggatttgggcgccggcgctctcgtat
gccgatggccaattctggttagtgtataccgatgtgaaaatcaccgaaggcgcctttaaa
gacatgaccaactatctgaccaccgcgaccgatatccgtggtccgtggacagatcctgtc
aaactgaatggcgtcggttttgatgcctcgcttttccatgacgatgacgggcgtaaatat
atcgtgcagcaaacctgggaccatcgagagtaccatcaccccttcgatggcatcacgtta
actgagcttgataccaggacactgaaattaaaaccggcaaccgcgcggaccatctatcgg
ggcaccgccgttgcactcgtcgaggggccacacctctacaaactgaacggctattattat
cttttcgccgcgcagggggggaccgtctttacccaccaggaggttgttgcgcgctccaaa
accttagaggccaacagctttgaaaccgagccaggggaagtcttcttaacgaacgtcgat
accccggacagctatatccagaaacaagggcatggcgctttggtttccaccccgaaaggt
gagtggtattatgcctcgctctgcgcccgtccgtggaatcgtccaggtgagtcggcctat
gatcctcgtggctggtcaactctgggtagagaaaccgcgatccagaaagtgtattgggat
gcggacggctggccgcgtatcgaagggggccacggcggaaaaacctttgtcgaagggcca
accgatgccatttacaccgaaagtgccaaagaccatagccagtacgatgcgtttaaaaca
gtaacgctcgatcctaactggaatacgctgcgggttccgttcacagaaaaaatggggacc
accggcgatggcaagctgacgttaatcggccagggttcattagccaatacgcataacctg
tcgcttattgcccgacgctggcaagccttctattttgatgcccaggttaaagtgaaattt
aatccgttcaattatcaacagatggcaggattaacgaattactacaacgatcgccactgg
agctttgtgttcatcacctggaatgagattaatggctcagtcattgagatcggtgaaaat
aatcgtggaaaatacacgtcatatttgaaagatgatgccatcaagatccccgaagggacc
gagttcgtctggttccgcagcaaagttcgcaaacaaacgtatagctatgaatacagtttt
gatggggtcaatttcacggaaatccccgttaaattagatgccgccattctttccgacgat
tacgtgctgcaaagctatggcgggttctttaccggggcgttcgttggccttgcggctgta
gactactcaggttatgacgccagcgcagagttttacgatttccattatcaggagctgggc
gatgcgttaatggccgatggtacgtatagctggcaagccagcgaatcacggtttaattaa
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