Raoultella ornithinolytica B6: RORB6_16130
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Entry
RORB6_16130 CDS
T02625
Name
(GenBank) alpha-N-arabinofuranosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00520
Amino sugar and nucleotide sugar metabolism
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
RORB6_16130
Enzymes [BR:
ror01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
RORB6_16130
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
AGJ87907
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Position
complement(3540348..3541967)
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AA seq
539 aa
AA seq
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MYTITNPILTGFNPDPSMCRQGEDYYIATSTFEWFPGVRIYHSRDLKNWSLVSTPLDRVS
MLDMKGNPDSGGIWAPCLSYADGLFWLLYTDVKIVDSPWKNGRNYLVTAPSIEGPWSEPI
AMGNGGFDPSLFHDSDGRKYYIYRPWGPRHHSDPHCTIVLQEYFPQTQTLSKTRKTLFTG
TALRYTEGAHLYHKEGWYYLLVAEGGTSYEHAVVVLRAKNIDGPYELHPDGTLMTSWHLP
ENPLQKSGHGSLLETHTGEWYMAYLTSRPQRLPGVPLLASGGRGYCSLGRETGIARIAWH
DGWPSVEGGKHAQLNVPGPQMAESRVVADERWREEFNRPTLNPELQTLRIPFDDTLGSLN
ARPGFLRLYGNDSLNSTFTQSTVARRWQHFAFRAETRMEFAPQNFQQSAGLTCYYNSKNW
SYCFVDYEEGQGRTIKVLQLDHNVPSWPLHEHPIAVPDAAQSIWLRVDVDHLVYRYSYSF
DGEQWHTVPVEYAAWKLSDDYIGGRGFFTGAFVGLHCEDISGDGCYADFDYFSYEPVVG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgataactaacccgattctgaccggttttaacccggatccgtcaatgtgtcgc
cagggcgaggattactacatcgccacctccaccttcgagtggtttccgggagtgcggatt
taccactcgcgggatttgaaaaactggtcgctggtgagcacgccgctggatcgcgtgtcg
atgctggatatgaaaggcaaccccgactccggcgggatctgggcgccgtgtctgagctac
gccgacgggctgttctggctgctgtataccgatgtgaaaatcgtcgactcgccgtggaaa
aacggtcgcaactatctggtcaccgccccctctattgaggggccgtggagtgaaccgatc
gcgatgggtaacggcggctttgacccgtcgctgtttcacgattcggacgggcgtaaatat
tatatttaccgcccgtgggggccgcgtcaccacagtgacccgcactgtacgatcgtcctg
caggagtatttcccgcagacgcagaccctgtcgaagacgcgaaaaaccctgtttaccggc
acggcgctgcgctataccgaaggggcccatctgtaccataaagagggctggtactatctg
ctggtggccgaaggcggcaccagttatgaacatgcggtggtggtgctcagagcgaaaaat
atcgacgggccgtacgaactgcatccggacgggacgctgatgaccagctggcatctgccg
gaaaatccgctgcagaaaagcggccacggttcgctgctggagacccacaccggcgaatgg
tatatggcctatctcaccagccgtccgcagcgcttgcccggtgtgccgctgctggcctcc
ggcgggcgcggctactgctcgctggggcgggaaaccggcatcgcgcgcatcgcctggcac
gacggctggccgtcggtggaagggggaaaacacgcgcagctaaacgtgccggggccgcaa
atggctgaaagtcgtgtcgtggctgatgagcgctggcgagaagagttcaaccgcccgacg
ctcaacccggagctgcaaacgctgcgtatacccttcgatgacaccttagggtcgctgaat
gcccgtcccggctttctgcgcctgtacggcaacgattcgctcaactcgacgttcacccag
tccaccgtcgcccggcgctggcagcactttgccttccgcgccgaaacgcgaatggagttt
gccccgcagaattttcaacagagcgccggattaacctgttattacaacagcaaaaactgg
agctactgcttcgttgactatgaagagggacagggcagaaccattaaggtgttgcagctc
gatcataacgtgccgtcgtggccgctgcatgaacacccgatcgcggtaccggatgccgcg
cagagcatatggctccgggtcgacgtcgaccatctcgtctatcgctacagctactcgttt
gacggcgagcagtggcacaccgtgccggtggaatatgccgcctggaagctgtcggacgat
tacatcggcgggcgcgggttctttaccggcgcctttgtcggcctgcactgcgaggatatc
agcggcgacggctgctatgcggactttgactacttcagctatgagccggtagtcggataa
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