Raoultella ornithinolytica B6: RORB6_16145
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Entry
RORB6_16145 CDS
T02625
Name
(GenBank) protein YagE
KO
K22397
2-dehydro-3-deoxy-D-pentonate aldolase [EC:
4.1.2.28
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00040
Pentose and glucuronate interconversions
ror01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RORB6_16145
Enzymes [BR:
ror01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.28 2-dehydro-3-deoxy-D-pentonate aldolase
RORB6_16145
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
Peripla_BP_4
Asp_Glu_race
PA
Motif
Other DBs
NCBI-ProteinID:
AGJ87910
LinkDB
All DBs
Position
complement(3545701..3546609)
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AA seq
302 aa
AA seq
DB search
MPQTVQFSGIIPPVSTIFTADGQFDKPGTAALIDDMIAAGVDGLFFLGSGGEFSQLNADE
RKAIAAFAIAHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEPNL
IRYFQQVAESVTLPVLLYNFPALSGQDLTPALVKTLADSRSNIVGIKDTIDSVAHLRSMI
ETVKSAHPHFSVLCGYDDHLFNTLLLGGDGAISASGNFAPQISVKLLQAFRDGNLAEAAR
YHQTLLQIPQLYQLDTPFVNVIKEAIVLCGRPISTHVLPPSSPLDEAKKRQLKTLLQQLR
LC
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaaccgtgcagttctcggggattattccgcctgtctccaccatttttaccgcc
gatggccagttcgataaaccgggtaccgccgcgctgatcgacgacatgatcgccgcgggc
gtcgacggcctgttcttcctcggcagcggcggggagttctcgcagcttaatgccgatgag
cgcaaagccattgccgccttcgccatcgcccacgtcgatcgccgggtaccggtactgatt
ggtaccggcggcaccaacgcccgggagaccatcgaactcagccagcacgcgcagcaggcc
ggcgccgacgggatcgtggtcattaacccctattactggaaagtctctgagcccaacctg
attcgctacttccagcaggtagccgagagcgtcacgctgccggtgctgctgtataacttc
ccggccttgagcggtcaggatctgacgcccgcgttggtcaaaactctcgccgactcgcgc
agcaatattgtcggcatcaaagacaccatcgactcagtggctcatctgcgtagcatgatt
gagacggtgaaatcggcgcacccgcacttctcggtgctgtgcggttacgatgaccacctg
tttaacaccctgctgctgggcggcgacggggccatctcggccagcggtaactttgccccg
cagatctcggtaaagctgctgcaggccttccgcgacggcaacctggcggaagccgcgcgc
taccatcagacgctgctgcaaatcccgcagctgtaccagctggatacgccgtttgtgaat
gtgattaaagaggcgatcgtgctgtgcgggcggccgatctccacgcatgtgctgcccccg
tcctctccgctggacgaggcgaaaaagcggcagctcaaaacgctactacaacagctcaga
ctctgctga
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